Plant genome sequence and uses thereof

Organic compounds -- part of the class 532-570 series – Organic compounds – Carbohydrates or derivatives

Reexamination Certificate

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C435S006120, C536S023200

Reexamination Certificate

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07868149

ABSTRACT:
The present invention is in the field of plant biochemistry and genetics. More specifically the invention relates to nucleic acid molecules from plant cells, in particular, genomic DNA sequences from rice plants and nucleic acid molecules that contain markers, in particular, single nucleotide polymorphism (SNP) and repetitive element markers. In addition, the present invention provides nucleic acid molecules having regulatory elements or encoding proteins or fragments thereof. The invention also relates to proteins and fragments of proteins so encoded and antibodies capable of binding the proteins. The invention also relates to methods of using the nucleic acid molecules, markers, repetitive elements and fragments of repetitive elements, regulatory elements, proteins and fragments of proteins, and antibodies, for example for genome mapping, gene identification and analysis, plant breeding, preparation of constructs for use in plant gene expression, and transgenic plants.

REFERENCES:
patent: 4784949 (1988-11-01), Gelfand et al.
patent: 4956282 (1990-09-01), Goodman et al.
patent: 5011912 (1991-04-01), Hopp et al.
patent: 6093545 (2000-07-01), Goodearl et al.
patent: WO 00/18922 (2000-04-01), None
“Revision History for BAF30287,” printed from <http://www.ncbi.nlm.nih.gov/entrez/sutils/girevhist.cgi?val=BAF30287&log$=seqview> on Mar. 1, 2009.
Database sequence GenBank U93559, printed on May 28, 2009 from http://www.ncbi.nlm.nih.gov
uccore/1935917.
Jeong et al. Korean J. Biolo. Sc. vol. 1, pp. 135-142, 1997.
U.S. Appl. No. 09/815,254, filed Mar. 23, 2001, Boukharov et al.
U.S. Appl. No. 10/425,114, filed Mar. 28, 2003, Liu et al.
U.S. Appl. No. 11/329,175, filed Jan. 11, 2006, CaJacob et al.
U.S. Appl. No. 11/329,160, filed Jan. 11, 2006, Bhat et al.
U.S. Appl. No. 11/329,388, filed Jan. 11, 2006, Andersen et al.
U.S. Appl. No. 11/330,082, filed Jan. 12, 2006, Buehler et al.
U.S. Appl. No. 11/330,083, filed Jan. 12, 2006, Byrum et al.
U.S. Appl. No. 11/330,364, filed Jan. 12, 2006, Abad et al.
U.S. Appl. No. 11/331,019, filed Jan. 13, 2006, Fincher et al.
U.S. Appl. No. 11/331,032, filed Jan. 13, 2006, Fincher et al.
U.S. Appl. No. 11/352,295, filed Feb. 13, 2006, Andersen et al.
U.S. Appl. No. 11/353,150, filed Feb. 14, 2006, Andersen et al.
U.S. Appl. No. 11/486,299, filed Jul. 14, 2006, Byrum.
U.S. Appl. No. 11/490,207, filed Jul. 21, 2006, Brown et al.
U.S. Appl. No. 11/491,178, filed Jul. 24, 2006, Hinkle et al.
U.S. Appl. No. 11/491,371, filed Jul. 24, 2006, Byrum.
U.S. Appl. No. 11/497,489, filed Aug. 2, 2006, Byrum et al.
U.S. Appl. No. 11/503,243, filed Aug. 14, 2006, Kovalic et al.
U.S. Appl. No. 11/520,715, filed Sep. 14, 2006, Liu et al..
U.S. Appl. No. 11/521,349, filed Sep. 15, 2006, Byrum et al.
U.S. Appl. No. 11/595,983, filed Nov. 13, 2006, Boukharov et al.
AA501409, EST Database (Aug. 19, 1997).
Aach et al., “ent-Kaurene Biosynthesis in a Cell-Free System From Wheat (Triticum aestivumL.) Seedlings and the Localisation ofent-Kaurene Synthetase in Plastids of Three Species”,Planta197(2), 333-342 (1995).
Adams et al., “Complementary DNA Sequencing: Expressed Sequence Tags and Human Genome Project”,Science252(5013), 1651-1656 (1991).
Ait-Ali et al., “TheLSLocus of Pea Encodes the Gibberellin Biosynthesis Enzymeent-Kaurene Synthase A”,Plant J. 11(3), 443-454 (1997).
Anaviev et al., “Oat-Maize Chromosome Addition Lines: A New System for Mapping the Maize Genome”,Proc. Natl. Acad. Sci. USA94, 3524-3529 (1997).
Anton et al., “Sequencing and Overexpression of theEscherichia coli aroEGene Encoding Shikimate Dehydrogenase”,Biochem. J. 249, 319-326 (1988).
Attwood, “The Babel of Bioinoformatics”,Science290(5491), 471-473 (2000).
Bentley, “The Shikimate Pathway—A Metabolic Tree with Many Branches,”Critical Rev. Biochem. Mol. Biol. 25(5), 307-384 (1990).
Birkenbihl et al., “Cosmid-Derived Map ofE.coliStrain BHE2600 in Comparison to the Map of Strain W3110”,Nucleic Acids Res. 17(13), 5057-5069 (1989).
Bishop et al., “The TomatoDwarfGene Isolated by Heterologous Transposon Tagging Encodes the First Member of a New Cytochrome P450 Family”,Plant Cell8, 959-969 (1996).
Bonner et al., “Cloning of cDNA Encoding the Bifunctional Dehydroquinase-Shikimate Dehydrogenease of Aromatic-Amino-Acid Biosynthesis inNicotiana tabacum”, Biochem J. 362, 11-14 (1994).
Bork, “Powers and Pitfalls in Sequence Analysis: The 70% Hurdle”,Genome Res., 10, 398-400 (2000).
Bougri et al., “Members of a Low-Copy Number Gene Family Encoding Glutamyl-tRNA Reductase are Differentially Expressed in Barley,”Plant J. 9(6), 867-878 (1996).
Broun et al., “Catalytic Plasticity of Fatty Acid Modification Enzymes Underlying Chemical Diversity of Plant Lipids”,Science282, 1315-1317 (1998).
Bukanov et al., “Ordered Cosmid Library and High-Resolution Physical-Genetic Aap ofHelicobacter pyloriStrain NCTC11638”,Mol. Microbiol. 11(3), 509-523 (1994).
Charles et al., “Isolation, Characterization and Nucleotide Sequences of thearoCGenes encoding Chorismate Synthase fromSalmonella typhiandEscherichia coli”, J. Gen. Microbiol. 136, 353-358 (1990).
Chen et al., “Microcolinearity insh2-Homologous Regions of the Maize, Rice, and Sorghum Genomes”,Proc. Natl. Acad. Sci. USA94, 3431-3435 (1997).
Coulson et al., “Toward a Physical Map of the Genome of the NematodeCaenorhabditis elegans”, Proc. Natl. Acad. Sci. USA83, 7821-7825 (1986).
Day et al., “Cloning of the cDNA for Glutamyl-tRNA Synthetase fromArabidopsis thaliana”, Biochim. Biophys. Acta1399(2-3):219-224 (1998).
Duncan et al., “The Overexpression and Complete Amino Acid Sequence ofEscherichia coli3-Dehydroquinase”,Biochem. J. 238, 475-483 (1986).
Eberhard et al., “Cloning and Expression in Yeast of a Higher Plant Chorismate Mutase”,FEBS Lett. 334(2), 233-236 (1993).
Ebert et al., “Identification of an Essential Upstream Element in the Nopaline Synthase Promoter by Stable and Transient Assays”,Proc. Natl. Acad. Sci. USA84(16), 5745-5749 (1987).
Efstratiadis et al., “Enzymatic in Vitro Synthesis of Globin Genes”,Cell7, 279-288 (1976).
Eiglmeier et al., “Use of an Ordered Cosmid Library to Deduce the Genomic Organization ofMycobacterium leprae”, Mol. Microbiol. 7(2), 197-206 (1993).
Evans et al., “Immunodetection of Recombinant Proteins Based on Antibodies Directed Against a Metal Binding Peptide Engineered for Purification by Immobilized Metal Affinity Chromatography,”J. Immunol. Meth. 156(2), 231-238 (1992) (Abstract Only).
Entrez Accession No. M21071 J03227 (Sep. 15, 1989).
Entrez Accession No. 170374 (Sep. 15, 1989).
Entrez Accession No. M27715 (Jun. 15, 1990).
Entrez Accession No. 153878 (Jun. 15, 1990).
Entrez Accession No. X59509 S55160 (Jun. 30, 1993).
Entrez Accession No. 48906 (Jun. 30, 1993).
Entrez Accession No. Y00710 (Sep. 12, 1993).
Entrez Accession No. 40978 (Sep. 12, 1993).
Entrez Accession No. Z26519 (Dec. 2, 1993).
Entrez Accession No. 429153 (Dec. 2, 1993).
Entrez Accession No. 551666 (Jan. 25, 1995).
Entrez Accession No. X81413 (Jan. 25, 1995).
Entrez Accession No. M87280 M99707 (Apr. 12, 1995).
Entrez Accession No. 551855 (Apr. 12, 1995).
Entrez Accession No. 313150 (Jun. 13, 1995).
Entrez Accession No. X73535 (Jun. 13, 1995).
Entrez Accession No. X04306 (Jul. 12, 1995).
Entrez Accession No. 40973 (Jul. 12, 1995).
Entrez Accession No. D63474 D16312 (Jul. 27, 1995).
Entrez Accession No. 474964 (Jul. 27, 1995).
Entrez Accession No. 987267 (Jul. 31, 1995).
Entrez Accession No. U32579 (Sep. 16, 1995).
Entrez Accession No. X82831 (Mar. 1, 1996).
Entrez Accession No. 1213067 (Mar. 1, 1996).
Entrez Accession No. 1220402 (Mar. 5, 1996).
Entrez Accession No. M63245 (Mar. 11, 1996).
Entrez Accession No. W49458 (May 28, 1996).
Entrez Accession No. 1421741 (Oct. 17, 1996).
Entrez Accession No. U54770 (Oct.

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