Method of displaying gene data, and recording medium

Details Method of displaying gene data, and recording medium Method of displaying gene data, and recording medium

2006-10-24

2006-10-24

Vo, Tim (Department: 2168)

Data processing: measuring, calibrating, or testing

Measurement system in a specific environment

Biological or biochemical

C702S027000

Reexamination Certificate

active

07127354

ABSTRACT:
A method of displaying gene data assists in discovering expression patterns specific to gene functions and inferring the function of a gene of which the function is unknown. A threshold value representing the degree of similarity of expression patterns is established in advance, and genes having the same function and genes with similar expression patterns to them are extracted and displayed. Cluster analysis is performed on the extracted genes by re-selecting the experiment patterns for clustering. Calculations are performed to see how many functions the genes belonging to a subtree have, and the proportion of each function in the subtree is determined. If a proportion exceeds a predetermined threshold value, they are regarded as a cluster (collection of genes with similar functions) and extracted.

REFERENCES:
patent: 5598350 (1997-01-01), Kawanishi et al.
patent: 07-274965 (1994-11-01), None
Eisen et al., Proc. Natl. Acad. Sci., vol. 95, pp. 14863-14868, 1998.
Webster's II New Riverside University Dictionary, The Riverside Publishing Company, 1984, p. 330.
Webb et al., PNAS, vol. 97, pp. 5773-5778, May 2000.
DeRisi et al., Science, vol. 278, pp. 680-686, 1997/.
Ross, Douglas T., et al., Systematic variation in gene expression patterns in human cancer cell lines, Nature Genetics, vol. 24, pp. 227-235 (Mar. 2000).
Samuel F. Schluter et al., “Molecular Origins and Evolution of Immunoglobulin Heavy-Chain Genes of Jawed Vertebrates”, Immunology Today (Nov. 1997), vol. 18, No. 11, pp. 543-549.
Wolfgang Ludwig et al., “A Software Environment for Sequence Data”, Technische Universitat, Munich, 43 pages, 1997.
Olivier Lichtarge et al., “Identification of Functional Surfaces of the Zinc Binding Domains of Intracellular Receptors”, J. Mol. Biol. (1997), vol. 274, pp. 325-337.

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