Data processing: measuring – calibrating – or testing – Measurement system in a specific environment – Biological or biochemical
Reexamination Certificate
2005-06-28
2005-06-28
Brusca, John S. (Department: 1631)
Data processing: measuring, calibrating, or testing
Measurement system in a specific environment
Biological or biochemical
36, C700S001000
Reexamination Certificate
active
06912469
ABSTRACT:
An electronic hybridization assay implements a hybridization reaction, or a sequence analysis, on sequences representative of the sequences of the molecules under examination to provide an output representative of a chemical hybridization reaction. An electronic hybridization machine implements a correlation algorithm where the correlation output provides information regarding the relationship between the molecules under examination. In one aspect, the degree of similarity between the molecules is indicated by the correlation output value. In another aspect, a locus of similarity between the molecules is indicated by a maximum value in the correlation output sequence. In a particular aspect, the sequences are encoded in an optimized format to optimize the operation of the operation of the electronic hybridization machine.
REFERENCES:
patent: 3670151 (1972-06-01), Lindsay et al.
patent: 4660164 (1987-04-01), Leibowitz
patent: 4729947 (1988-03-01), Middendorf et al.
patent: 5077753 (1991-12-01), Grau, Jr. et al.
patent: 5207880 (1993-05-01), Middendorf et al.
patent: 5549805 (1996-08-01), Middendorf et al.
patent: 5556749 (1996-09-01), Mitsuhashi et al.
patent: 5650785 (1997-07-01), Rodal
patent: 5784422 (1998-07-01), Heermann
patent: 5794068 (1998-08-01), Asghar et al.
patent: 5809060 (1998-09-01), Cafarella et al.
patent: 5849486 (1998-12-01), Heller et al.
patent: 5862231 (1999-01-01), Tokuhisa
patent: 5871697 (1999-02-01), Rothberg et al.
patent: 5925525 (1999-07-01), Fodor et al.
patent: 6021421 (2000-02-01), Retter et al.
patent: 6075812 (2000-06-01), Cafarella et al.
patent: WO 99/01940 (1999-01-01), None
patent: WO 99/01940 (1999-01-01), None
Donald C. Benson, Digital signal processing methods for biosequence comparison, Apr. 1990, Nucleic Acids Research, vol. 18, No. 10, pp. 3001-3006.
Altschul et al, Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Jul. 1997, Nucleic Acids Research, vol. 25, No. 17, pp. 3389-3402.
Ashley W. Gary, “Modeling, Synthesis, and Hybridization Properties of (L)-Ribonucleac Acid”, J.Am.Chem.Soc., 1992, vol. 114, No. 25, pp. 9731-9736.
Ashley, “Modleing, Synthesis, and Hybridization Properties of (L)-Ribonucleic Acid”, J.Am. Chem.Soc., 1992, pp. 9731-9736, vol. 114, No. 25, American Chemical Society, USA.
Benson, “Digital Signal Processing Methods for Biosequence Comparsion”, Nucleic Acids Research, 1990, pp. 3001-3306, vol. 18, No. 10, Oxford University Press, USA.
Altschul et al., “Gapped BLAST and PSI-BLAST: A New Generation of Protein Database Search Programs”, Nucleid Acids Research, 1997, pp. 3389-3402, vol. 25, No. 17, USA.
Proakis and Manolakis, “Introduction to Digital Signal Processing”, 1988, pp. 111-129, Macmillan Publishing Company, New York, USA.
Adren et al., “CCK Modulation Delivers 11Mbps for High Rate IEEE 802.11 Extension”, Wireless Symposium/Portable by Design Conference, 1999, Palm Bay, FL, USA.
Brusca John S.
Cool Kenneth J.
LandOfFree
Electronic hybridization assay and sequence analysis does not yet have a rating. At this time, there are no reviews or comments for this patent.
If you have personal experience with Electronic hybridization assay and sequence analysis, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Electronic hybridization assay and sequence analysis will most certainly appreciate the feedback.
Profile ID: LFUS-PAI-O-3462819