Biosynthesis of isopentenyl pyrophosphate

Chemistry: molecular biology and microbiology – Micro-organism – tissue cell culture or enzyme using process... – Preparing oxygen-containing organic compound

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C435S183000, C435S189000, C435S194000, C435S232000, C435S252300, C435S320100, C536S023200

Reexamination Certificate

active

10006909

ABSTRACT:
Methods for synthesizing isopentenyl pyrophosphate are provided. A first method comprises introducing into a host microorganism a plurality of heterologous nucleic acid sequences, each coding for a different enzyme in the mevalonate pathway for producing isopentenyl pyrophosphate. A related method comprises introducing into a host microorganism an intermediate in the mevalonate pathway and at least one heterologous nucleic acid sequence, each sequence coding for an enzyme in the mevalonate pathway necessary for converting the intermediate into isopentenyl pyrophosphate. The invention also provides nucleic acid sequences, enzymes, expression vectors, and transformed host cells for carrying out the methods.

REFERENCES:
patent: 6072045 (2000-06-01), Chappell et al.
patent: 6114160 (2000-09-01), Croteau et al.
patent: 6190895 (2001-02-01), Croteau et al.
patent: 6281017 (2001-08-01), Croteau et al.
patent: 6284506 (2001-09-01), Hoshino et al.
patent: 6291745 (2001-09-01), Meyer et al.
patent: 6306633 (2001-10-01), Wilding et al.
patent: 6495354 (2002-12-01), Chappell et al.
patent: 6531303 (2003-03-01), Millis et al.
patent: 6916972 (2005-07-01), Falco et al.
patent: 6989257 (2006-01-01), Berry et al.
patent: 2003/0033626 (2003-02-01), Hahn
patent: 2003/0148416 (2003-08-01), Berry et al.
patent: 2004/0029239 (2004-02-01), Ohto et al.
patent: 2004/0063182 (2004-04-01), Ohto et al.
patent: 2004/0194162 (2004-09-01), Hahn
patent: 2005/0241017 (2005-10-01), Hahn
patent: 2005/0266518 (2005-12-01), Berry et al.
patent: 0955363 (1999-11-01), None
patent: 1360300 (2003-11-01), None
patent: 1392824 (2004-03-01), None
patent: WO02/10398 (2002-02-01), None
patent: WO02099095 (2002-12-01), None
patent: WO0001650 (2005-01-01), None
66 FR 1099, Friday, Jan. 5, 2001.
Tatiana et al. FEMS Microbiol Lett. May 15, 1999; 174(2): 247-250.
Blast 2 Sequences results. Sequence 1 gi 5531936, Sequence 2 gi 546900, printed on Jun. 24, 2005.
Takagi et al. J Bacteriol. Aug. 2000;182(15):4153-7.
Wang et al. Accession AF119715. Apr. 22, 1999.
Balbas et al. Gene. Jun. 12, 1996;172(1):65-9.
Fujisaki et al. J Biochem (Tokyo). May 1986;99(5):1327-37. ABSTRACT.
Hiser et al. J Biol Chem. Dec. 16, 1994;269(50):31383-9.
Hiser et al. Accession L20428. Feb. 23, 1995.
Altincieck et al. (2001). “GcpE Is Involved in the 2-C-Methyl-D-Erythritol 4-Phosphate Pathway of Isoprenoid Biosynthesis inEscherichia coli,” Journal of Bacteriology183(8):2411-2416.
Amann et al. (1988), “Tightly RegulatedTacPromoter Vectors Useful for the Expression of Unfused and Fused Proteins inEscherichia coli,” Gene69:301-315.
Barkovich et al. (2001). “Metabolic Engineering of Isoprenoids,”Metabolic Engineering3(1):27-39.
Campos et al. (2001). “Identification ofgepEas a Novel Gene of the 2-C-Methyl-D-Erythritol 4-Phosphate Pathway for Isoprenoid Biosynthesis inEscherichia coli,” FEBS Letters488:170-173.
Campos et al. (2001), “Escherichia coliEngineered to Synthesize Isopentenyl Diphosphate and Dimethylallyl Diphosphate from Mevalonate: A Novel System for the Genetic Analysis of the 2-C-Methyl-D-Erythritol 4-Phosphate Pathway for Isoprenoid Biosynthesis,”Biochem. J. 353:59-67.
Cunningham et al. (1994), “Molecular Structure and Enzymatic Function of Lycopene Cyclase from the CyanobacteriumSynechococcussp Strain PCC7942,”The Plant Cell6:1107-1121.
Dairi et al. (2001), “Eubacterial Diterpene Cyclase Genes Essential for Production of the Isoprenoid Antibiotic Terpentecin,”Journal of Bacteriology183(20):6085-6094.
Guzman et al. (1995), “Tight Regulation, Modulation, and High-Level Expression by Vectors Containing the Arabinose PBADPromoter,”Journal of Bacteriology177(14):4121-4130.
Hahn et al. (1999), “Escherichia coliOpen Reading Frame 696 Isidi, a Nonessential Gene Encoding Isopentenyl Diphosphate Isomerase,”Journal of Bacteriology181(15):4499-4504.
Hahn et al. (2001), “1-Deoxy-D-Xylulose 5-Phosphate Synthase, the Gene Product of Open Reading Frame (ORF) 2816 and ORF 2895 inRhodobacter capsulatus,” Journal of Bacteriology183(1):1-11.
Hamano et al. (2001), “Cloning of a Gene Cluster Encoding Enzymes Responsible for the Mevalonate Pathway from a Terpenoid-Antibiotic-ProducingStreptomycesStrain,”Biosci. Biotechnol. Biochem. 65(7):1627-1635.
Kaneda et al. (2001), “An Unusual Isopentenyl Diphosphate Isomerase Found in the Mevalonate Pathway Gene Cluster fromStreptomycessp. Strain CL190,”PNAS98(3):932-937.
Kim et al. (2001), “Metabolic Engineering of the Nonmevalonate Isopentenyl Diphosphate Synthesis Pathway inEscherichia coliEnhances Lycopene Production,”Biotechnology and Bioengineering72(4):408-415.
Kovach et al. (1994), “pBBRIMCS: A Broad-Host-Range Cloning Vector,”BioTechniques16(5):800-802.
Kovach et al (1995), “Four New Derivatives of the Broad-Host-Range Cloning Vector pBBRIMCS. Carrying Different Antibiotic-Resistance Cassettes,”Gene166:175-176.
Mahmoud et al. (2001), “Metabolic Engineering of Essential Oil Yield and Composition in Mint by Altering Expression of Deoxyxylulose Phosphate Reductoisomerase and Menthofuran Synthase,”PNAS98:(15):8915-8920.
McAteer et al. (2001), “ThelytBGene ofEscherichia coliIs Essential and Specifies a Product Needed for Isoprenoid Biosynthesis,”Journal of Bacteriology183(24):7403-7407.
Oulmouden et al. (1991), “Nucleotide Sequence of theERG12Gene ofSaccharomyces cerevisiaeEncoding Mevalonate Kinase,”Current Genetics19:9-14.
Polakowski et al. (1998), “Overexpression of a Cytosolic Hydroxymethylglutaryl-CoA Reductase Leads to Squalene Accumulation in Yeast,”Appl. Microbiol. Biotechnol. 49:66-71.
Rohdich et al. (2002), “Studies on the Nonmevalonate Terpene Biosynthetic Pathway: Metabolic Role of IspH (LytB) Protein,”PNAS99(3):1158-1163.
Rohlin et al. (2001), “Microbioal Pathway Engineering for Industrial Processes: Evolution, Combinatorial Biosynthesis and Rational Design,”Current Opinion in Microbiology4:330-335.
Rohmer et al. (1993), “Isoprenoid Biosynthesis in Bacteria: A Novel Pathway for the Early Steps Leading to Isopentenyl Diphosphate,”Biochem. J. 295:517-524.
Sandmann (2001), “Carotenoid Biosynthesis and Biotechnological Application,”Archives of Biochemistry and Biophysics385:(1):4-12.
Szkopinska et al. (2000), “The Regulation of Activity of Main Mevalonic Acid Pathway Enzymes: Farnesyl Diphosphate Synthase, 3-Hydroxy-3-Methylglutaryl-CoA Reductase, and Squalene Synthase in YeastSaccharomyces cerevidiae,” Biochemical and Biophysical Research Communications267:473-477.
Takagi et al. (2000), “A Gene Cluster for the Mevalonate Pathway fromStreptomycessp. Strain CL190,”Journal of Bacteriology182(15):4153-4157.
Toth et al. (1996), “Molecular Cloning and Expression of the cDNAs Encoding Human and Yeast Mevalonate Pyrophosphate Decarboxylase,”The Journal of Biological Chemistry271(14)7895-7898.
Tsay et al. (1991), “Cloning and Characterization ofERG8, an Essential Gene ofSaccharomyces cervisiaethat Encodes Phosphomevalonate Kinase,”Molecular and Cellular Biology11(2):620-631.
Wang et al. (1999), “Engineered Isoprenoid Pathway Enhances Astaxanthin Production inEscherichia coli,” Biotechnology and Bioengineering62(2):235-241.
Wang et al. (2000), “Directed evolution of Matabolically EngineeredEscherichia colifor Carotenoid Production,”Biotechnol. Prog. 16(6):922-926.
National Science Foundation Award Abstract No. 9911463, Feb. 10, 2006.

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Biosynthesis of isopentenyl pyrophosphate does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Biosynthesis of isopentenyl pyrophosphate, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Biosynthesis of isopentenyl pyrophosphate will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-3868756

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.