Method of comparing a target nucleic acid and a reference...

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C435S091100, C435S287200, C536S023100, C536S024300

Reexamination Certificate

active

07399584

ABSTRACT:
The invention provides methods of comparing a target nucleic acid with a reference nucleic acid using nucleic acid arrays.

REFERENCES:
patent: 4656127 (1987-04-01), Mundy
patent: 4683195 (1987-07-01), Mullis et al.
patent: 5002867 (1991-03-01), Macevicz
patent: 5057410 (1991-10-01), Kawasaki et al.
patent: 5143854 (1992-09-01), Pirrung et al.
patent: 5202231 (1993-04-01), Drmanac et al.
patent: 5273632 (1993-12-01), Stockham et al.
patent: 5445934 (1995-08-01), Fodor et al.
patent: 5527681 (1996-06-01), Holmes
patent: 5660979 (1997-08-01), Romano et al.
patent: 5681942 (1997-10-01), Buchwald et al.
patent: 5700637 (1997-12-01), Southern
patent: 5837832 (1998-11-01), Chee et al.
patent: 6027880 (2000-02-01), Cronin et al.
patent: 6309823 (2001-10-01), Cronin et al.
patent: WO89/10977 (1989-11-01), None
patent: WO89/11548 (1989-11-01), None
patent: WO90/00626 (1990-01-01), None
patent: WO90/03382 (1990-04-01), None
patent: WO92/10092 (1992-06-01), None
patent: WO92/10588 (1992-06-01), None
patent: WO93/17126 (1993-09-01), None
patent: WO95/00530 (1995-01-01), None
patent: WO95/11995 (1995-05-01), None
patent: WO95/26973 (1995-10-01), None
Chee et al., “Towards sequencing mitochronidrial DNA polymorphisms by hybridization to a custom oligonucleotide probe array”,American Society of Human Genetics, 43rdAnnual Meeting, Oct. 5-9, 1993; abstract.
Chee et al., “Genetic analysis by hybridization to sequence-specific DNA arrays”,American Society of Human Genetics, 43rdAnnual Meeting, Oct. 5-9, 1993; abstract.
Chee et al., “A new method for rapid sequence analysis: detection of HIV reverse transcriptase mutations”,HIV Drug Resistance Third International Workshop, Aug. 2-5, ???; abstract.
Chee et al., “Sequence analysis by hybridization: the human mitochondrial genome on a chip”,Genome Sequencing and Analysis Conference V, Sep. 17-21, 1994; abstract.
Chee et al., “Sequencing mitochondrial DNA polymorphisms by hybridization”,American Society of Human Genetics, 44thAnnual Meeting, Oct. 18-22, 1994; abstract.
Chee, “Resequencing DNA by hybridization to oligonucleotide arrays”,Western Biotech Conference, Oct. 18-21, 1995; abstract.
Cronin et al., “Hybridization to arrays of oligonucleotides”,Nucleic Acids in Medical Applications Conference sponsored by AACC, Jan. 1993; abstract.
Cronin et al., “Detection of cystic fibrosis gene mutations by hybridization to GeneChip™ probe arrays”,Nucleic Acids in Medical Applications Conference, sponsored by AACC, Nov. 1993; abstract.
Cronin et al., “GeneChip™ screening assay for cystic fibrosis mutations”,American Society of Human Genetics Meeting, Oct. 1994; abstract.
Cronin et al., Detecting cystic fibrosis mutations by hybridization to DNA probe arraysUCSF School of Medicine Symposium: Molecular Approaches to Laboratory Diagnosis, Feb. 1995; abstract.
Elder, “Analysis of DNA oligonucleotide hybridization data by maximum entropy”,Maximum Entropy and Bayesian Methods, 1992, pp. 1-10.
Hagstrom et al., “Maximum likelihood genetic sequence reconstruction from oligo content”,Argonne Nat'l Laboratory Preprint MCS-P309-0592, Sep. 1992.
Lipschutz, “Likelihood DNA sequencing by hybridization”,Jrnl. Of Biomolecular Structure&Dynamics, vol. 11, 1993, pp. 637-653.
Lipschutz, “Oligonucleotide arrays for hybridization analysis”,Genome Sequencing and Analysis Conference V, Oct. 23-27, 1993; abstract.
Lobban et al., “DNA chips for genetic analysis”,Genome Sequencing and Analysis Conference V, Oct. 23-27, 1993; abstract.
Lockhart et al., “DNA sequencing by hybridization on high-density probe arrays: enzymatic enhancement and sequence reconstruction”,American Society of Human Genetics, 44thAnnual Meeting, Oct. 18-2, 1994; abstract.
Luo et al., “Cellular protein modulates effects of human immunodeficiency virus type 1 rev”J. Virol., vol. 68, 1994, pp. 3850-3856.
Maxam et al., “A new method for sequencing DNA”,Proc. Natl. Acad. Sci. USA, vol. 74, 1977, pp. 560-564.
Maxam et al., “Sequencing end-labeled DNA with base-specific chemical cleavages”,Methods in Enzymology, vol. 65, 1980, pp. 449-560.
Miyada et al., “Detection of cystic fibrosis mutations in a GeneChip™ assay format”,Amer. Society of Human. Genetics, 44thAnnual Meeting, Oct. 1994; abstract.
Querat et al., “Nucleotide sequence analysis of SA-OMVV, a Visna-related ovine lentivirus: phylogenetic history of lentiviruses”,Virology, vol. 175, 1990, pp. 434-447.
Ratner et al., “Complete nucleotide sequence of the AIDS virus, HTLV-III”,Nature, vol. 313, 1985, pp. 277-284.
Sambrook et al., “Molecular cloning”, 1989, pp. 1145-1147.
Sanger et al., “DNA sequencing with chain-terminating inhibitors”,Proc. Natl. Acad. Sci. USA, vol. 74, 1977, pp. 5463-5467.
Southern et al., “Analyzing and comparing nucleic acid sequences by hybridization to arrays of oligonucleotide: evaluation using experimental models”,Genomics 13, 1942, pp. 1008-1017.
Stratagene 1988 Catalog, “Gene Characterization Kits”, p. 39.
Wain-Hobson et al., “Nucleotide sequence of the AIDS virus, LAV”,Cell, vol. 40, 1985, pp. 9-17.

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Method of comparing a target nucleic acid and a reference... does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Method of comparing a target nucleic acid and a reference..., we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Method of comparing a target nucleic acid and a reference... will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-3972018

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.