Nonenzymatic catalytic signal amplification for nucleic acid...

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C435S287200, C536S024300

Reexamination Certificate

active

07005265

ABSTRACT:
Devices, methods, and kits for amplifying the signal from hybridization reactions between nucleic acid probes and their cognate targets are presented. The devices provide partially-duplexed, immobilized probe complexes, spatially separate from and separately addressable from immobilized docking strands. Cognate target acts catalytically to transfer probe from the site of probe complex immobilization to the site of immobilized docking strand, generating a detectable signal. The methods and kits of the present invention may be used to identify the presence of cognate target in a fluid sample.

REFERENCES:
patent: 4766062 (1988-08-01), Diamond et al.
patent: 4766064 (1988-08-01), Williams et al.
patent: 4795701 (1989-01-01), Vary
patent: 4818680 (1989-04-01), Collins et al.
patent: 5268266 (1993-12-01), Fritsch et al.
patent: 5445933 (1995-08-01), Eadie et al.
patent: 5888780 (1999-03-01), Dahlberg et al.
patent: 5925517 (1999-07-01), Tyagi et al.
patent: 5958681 (1999-09-01), Wetmur et al.
patent: 5985557 (1999-11-01), Prudent et al.
patent: 5994069 (1999-11-01), Hall et al.
patent: 6001567 (1999-12-01), Brow et al.
patent: 6043060 (2000-03-01), Imanishi
patent: 6090543 (2000-07-01), Prudent et al.
patent: 6103476 (2000-08-01), Tyagi et al.
patent: 6130047 (2000-10-01), Nadeau et al.
patent: 6238927 (2001-05-01), Abrams et al.
patent: 6255051 (2001-07-01), Hammond et al.
patent: 6268490 (2001-07-01), Imanishi et al.
patent: 6358685 (2002-03-01), Wetmur et al.
patent: 6361945 (2002-03-01), Becker et al.
patent: 6531302 (2003-03-01), Nerenberg et al.
patent: 2002/0045182 (2002-04-01), Singh et al.
patent: 0 164 876 (1985-12-01), None
patent: 0 167 238 (1986-01-01), None
patent: WO 98/39352 (1998-09-01), None
patent: WO 98/53311 (1998-11-01), None
patent: WO 99/14226 (1999-03-01), None
patent: WO 00/56748 (2000-09-01), None
patent: WO 00/62036 (2000-10-01), None
patent: WO 00/66604 (2000-11-01), None
patent: WO 00/69560 (2000-11-01), None
patent: WO 00/78455 (2000-12-01), None
patent: WO 00/79285 (2000-12-01), None
patent: WO 01/46465 (2001-06-01), None
patent: WO 01/47638 (2001-07-01), None
patent: WO 02/29112 (2002-04-01), None
Bangs Laboratories, Inc., “Microsphere Detection Guide,” http://www.bangslabs.com/products/bangs/guide.php, Aug. 2002.
Bonnet et al., “Thermodynamic Basis of the Enhanced Specificity of Structured DNA Probes,”Proc. Natl. Acad. Sci. USA96: 6171-6176 (1999).
Braasch et al., “Locked Nucleic Acid (LNA): Fine-Tuning the Recognition on DNA and RNA,”Chem. Biol.8(1): 1-7 (2001).
Brenner et al., “In Vitro Cloning of Complex Mixtures of DNA on Microbeads: Physical Separation of Differentially Expressed cDNAs,”Proc. Natl. Acad. Sci. USAvol. 97 No. 4: pp. 1665-1670 (2000).
Cambien et al., “Sequence Diversity in 36 Candidate Genes for Cardiovascular Disorders,”Am. J. Hum. Genet.65: 183-191 (1999).
Cargill et al., “Characterization of Single-Nucleotide Polymorphisms in Coding Regions of Human Genes,”Nature Genet.22: 231-238 (1999) (Erratum in:Nat Genet23(3): 373 (Nov. 1999)).
Cargill et al., “Characterization of Single-Nucleotide Polymorphisms in Coding Regions of Human Genes,” Erratum in:Nat Genet23(3): 373 (Nov. 1999).
Conner et al., “Detection of Sickle Cell βs-globin Allele by Hybridization with Synthetic Oligonucleotides,”Proc. Natl. Acad. Sci. USA80(1): 278-282 (1983).
Corey et al., “Strand Invasion by Oligonucleotide-Nuclease Conjugates,”Bioconjugate Chem.6: 93-100 (1995).
Dubertet et al., “Single-Mismatch Detection Using Gold-Quenched Fluorescent Oligonucleotides,”Nature Biotechnology19: 365-370 (2001).
Guo et al., “Enhanced Discrimination of Single Nucleotide Polymorphisms by Artificial Mismatch Hybridization,”Nature Biotechnology15: 331-335 (1997).
Halushka et al., “Patterns of Single-Nucleotide Polymorphisms in Candidate Genes for Blood-Pressure Homeostasis,”Nature Genet.22: 239-247 (1999).
International SNP Map Working Group, “A Map of Human Genome Sequence Variation Containing 1.42 Million Single Nucleotide Polymorphisms,”Nature409: 928-933 (2001).
International Human Genome Sequencing Consortium, “Initial Sequencing and Analysis of the Human Genome,”Nature409: 860-921 (2001).
Johnson et al., “Strategies in Complex Disease Mapping,”Cur.. Opin. Genet. Dev.10(3): 330-334 (2000).
Kokoris et al., “High-Throughput SNP Genotyping with the Masscode System,”Mol Diagn.5(4): 329-340 (2000).
Kricka et al., “Comparison of 5-Hydroxy-2, 3-Dihydrophthalazine-1, 4-Dione and Luminol as Co-Substrates for Detection of Horseradish Peroxidase in Enhanced Chemiluminescent Reactions,”Journal of Immunoassayvol. 17: pp. 67-83 (1996).
Kurakin et al., “Cooperative Strand Displacement by Peptide Nucleic Acid (PNA),”Chemistry&Biology5(2): 81-89 (1998).
Lander et al., “The Chipping Forecast,”Supplement to Nature Geneticsvol. 21 No. 1: pp. 1-60 (Jan. 1999).
Leone et al., “Molecular Beacon Probes Combined with Amplification by NASBA Enable Homogeneous, Real-Time Detection of RNA,”Nucleic Acids Research26(9): 2150-2155 (1998).
Li et al., “A New Class of Homogeneous Nucleic Acid Probes Based on Specific Displacement Hybridization,”Nucleic Acids Research30(2): 1-9 (2002).
Li et al., “Low Nucleotide Diversity in Man,”Genetics129: 513-523 (1991).
Lundqvist et al., “Influence of Different Luminols on the Characteristics of the Chemiluminescence Reaction in Human Neutrophils,”J. Biolumin. Chemilumin.vol. 10: pp. 353-359 (1995).
Lyer et al., “Modified Oligonucleotides—Synthesis, Properties, and Applications,”Curr. Opin. Mol. Ther.1(3): 344-358 (1999).
Nielsen, Peter E., “Peptide Nucleic Acid: A Versatile Tool in Genetic Diagnostics and Molecular Biology,”Curr. Opin. Biotechnol.12(1): 16-20 (2001).
Riley et al., “The Use of Single Nucleotide Polymorphisms in the Isolation of Common Disease Genes”,Pharmacogenomics1(1):39-47 (2000).
Thorpe et al., “Bioluminescense and Chemiluminescence; Chapter 29: Enhanced Chemiluminescent Reactions Catalyzed by Horseradish Peroxidase,”Methods in Enzymologyvol. 133: pp. 331-353 (1986).
Venter et al., “The Sequence of the Human Genome,”Science291: 1304-1351 (2001).
Verma et al., “Modified Oligonucleotides: Synthesis and Strategy for Users,”Annu. Rev. Biochem.67: 99-134 (1998).
Wittung et al., “Direct Observation of Strand Invasion by Peptide Nucleic Acid (PNA) into Double-Stranded DNA,”J. Am. Chem. Soc.118: 7049-7054 (1996).

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Nonenzymatic catalytic signal amplification for nucleic acid... does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Nonenzymatic catalytic signal amplification for nucleic acid..., we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Nonenzymatic catalytic signal amplification for nucleic acid... will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-3633407

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.