Organic compounds -- part of the class 532-570 series – Organic compounds – Carbohydrates or derivatives
Reexamination Certificate
2000-04-11
2004-01-06
Huff, Sheela (Department: 1642)
Organic compounds -- part of the class 532-570 series
Organic compounds
Carbohydrates or derivatives
C435S320100, C530S327000, C530S324000, C530S326000, C530S325000, C530S350000
Reexamination Certificate
active
06673911
ABSTRACT:
TECHNICAL AREA OF THE INVENTION
The invention relates to the area of oncogenesis. More particularly, the invention relates to oncogenes and proteins.
BACKGROUND OF THE INVENTION
Mutations which activate expression of oncogenes play an important role in the development of neoplasias. Detection of mutations in oncogenes can be used to detect neoplastic cells and genetic predispositions to neoplasias. Thus, there is a need in the art for the identification of mammalian oncogenes which can be used in methods of diagnosing, prognosing, and treating neoplastic cells in humans and other mammals.
SUMMARY OF THE INVENTION
It is an object of the invention to provide an isolated and purified human polyhomeotic 2 protein.
It is another object of the invention to provide an isolated and purified human polyhomeotic 2 polypeptide.
It is yet another object of the invention to provide a human polyhomeotic 2 fusion protein.
It is still another object of the invention to provide a preparation of antibodies which specifically bind to a human polyhomeotic 2 protein.
It is yet another object of the invention to provide an isolated and purified subgenomic polynucleotide.
It is still another object of the invention to provide an expression construct for expressing all or a portion of a human polyhomeotic 2 protein.
It is a further object of the invention to provide a homologously recombinant cell comprising a DNA construct.
It is even another object of the invention to provide a method of identifying neoplastic tissue of a human.
It is another object of the invention to provide a method to aid in the diagnosis or prognosis of neoplasia in a human.
It is yet another object of the invention to provide a method to aid in detecting a genetic predisposition to neoplasia in a human.
It is still another object of the invention to provide a method of identifying a human chromosome 1.
It is even another object of the invention to provide a therapeutic composition for treating neoplasia.
It is another object of the invention to provide a method of treating neoplasia.
It is still another object of the invention to provide a method of inducing a cell to de-differentiate.
These and other objects of the invention are provided by one or more of the embodiments described below.
One embodiment of the invention provides an isolated and purified human polyhomeotic 2 protein. The isolated and purified human polyhomeotic 2 protein has the amino acid sequence shown in SEQ ID NO:2.
Another embodiment of the invention provides an isolated and purified human polyhomeotic 2 protein. The isolated and purified human polyhomeotic 2 protein has an amino acid sequence which is at least 85% identical to the amino acid sequence shown in SEQ ID NO:2.
Even another embodiment of the invention provides an isolated and purified human polyhomeotic 2 polypeptide. The isolated and purified; human polyhomeotic 2 polypeptide consists of at least 14 contiguous amino acids selected from the amino acid sequence shown in SEQ ID NO:2.
Yet another embodiment of the invention provides a human polyhomeotic 2 fusion protein. The human polyhomeotic 2 fusion protein comprises a first protein segment and a second protein segment fused together by means of a peptide bond. The first protein segment consists of at least 14 contiguous amino acids of a human polyhomeotic 2 protein.
Still another embodiment of the invention provides a preparation of antibodies which specifically bind to a human polyhomeotic 2 protein.
Even another embodiment of the invention provides an isolated and purified subgenomic polynucleotide. The isolated and purified subgenomic polynucleotide consists of at least 11 contiguous nucleotides selected from the nucleotide sequence shown in SEQ ID NO:1.
Yet another embodiment of the invention provides an expression construct for expressing all or a portion of a human polyhomeotic 2 protein. The expression construct comprises a promoter and a polynucleotide segment. The polynucleotide segment encodes at least 14 contiguous amino acids of a human polyhomeotic 2 protein. The polynucleotide segment is located downstream from the promoter. Transcription of the polynucleotide segment initiates at the promoter.
A further embodiment of the invention provides a homologously recombinant cell. The homologously recombinant cell comprises an incorporated new transcription unit wherein the new transcription unit comprises an, exogenous regulatory sequence, an exogenous exon, and a splice donor site. The transcription unit is located upstream of a coding sequence of an hph2 gene. The exogenous regulatory sequence directs transcription of the coding sequence of the hph2 gene. The new transcription unit is incorporated into the genome using segments of homologous DNA from the hph2 gene.
Still another embodiment of the invention provides a method of identifying neoplastic tissue of a human. The method comprises comparing the expression of a polyhomeotic 2 gene in a first tissue of a human suspected of being neoplastic with the expression of a polyhomeotic 2 gene in a second tissue of the human which is normal. Overexpression of the human polyhomeotic 2 gene in the first tissue identifies the first tissue as being neoplastic.
Even another embodiment of the invention provides a method to aid in the diagnosis or prognosis of neoplasia in a human. The method comprises comparing a polyhomeotic 2 gene, mRNA, or protein in a first tissue of a human suspected of being neoplastic with a polyhomeotic 2 gene, mRNA, or protein in a second tissue of a human which is normal. A difference between the polyhomeotic 2 genes, mRNAs, or proteins in the first and second tissues indicates neoplasia in the first tissue.
Another embodiment of the invention provides a method to aid in detecting a genetic predisposition to neoplasia in a human. The method comprises comparing a polyhomeotic 2 gene, mRNA, or protein in a fetal tissue of a human with a wild type human polyhomeotic 2 gene, mRNA, or protein. A difference between the polyhomeotic 2 gene, mRNA, or protein in the fetal tissue of the human and the wild-type human polyhomeotic 2 gene, mRNA, or protein indicates a genetic predisposition to neoplasia in the human.
Yet another embodiment of the invention provides method of identifing a human chromosome 1. The method comprises the steps of contacting a preparation of metaphase human chromosomes with a nucleotide probe comprising at least 12 contiguous nucleotides selected from the nucleotide sequence shown in SEQ ID NO:1 and detecting a region of a chromosome which specifically hybridizes to the nucleotide probe. A region of a chromosome which specifically hybridizes to the nucleotide probe is identified as a region of human chromosome 1.
Even another embodiment of the invention provides a therapeutic composition for treating neoplasia. The therapeutic- composition comprises a therapeutically effective amount of an antisense hph2 poynucleotide and a pharmaceutically acceptable carrier.
Yet another embodiment of the invention provides a therapeutic composition for treating neoplasia. The therapeutic composition comprises a therapeutically effective amount of an antibody which specifically binds to a human polyhomeotic 2 protein and a pharmaceutically acceptable carrier.
Still another embodiment of the invention provides a method of treating neoplasia. The method comprises the step of administering to a human a therapeutic hph2 composition.
A further embodiment of the invention provides a method of inducing a cell to change its pattern of differentiation. The method comprises the step of contacting a cell with an effective amount of a composition comprising all or a portion of a human polyhomeotic 2 gene or expression product. Said all or a portion of the human polyhomeotic 2 gene or expression product is capable of inducing the cell to change its pattern of differentiation.
The present invention thus provides the art with a novel human tumor suppressor gene called polyhomeotic 2 (hph2). The hph2 gene and protein can be used, inter alia, as therapeutic, prognostic, and diagnostic
Blackburn Robert P.
Chiron Corporation
Huff Sheela
Launer Charlene A.
Potter Jane E. R.
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