Chemistry: molecular biology and microbiology – Micro-organism – tissue cell culture or enzyme using process... – Recombinant dna technique included in method of making a...
Reexamination Certificate
1993-10-06
2003-05-13
Martinell, James (Department: 1631)
Chemistry: molecular biology and microbiology
Micro-organism, tissue cell culture or enzyme using process...
Recombinant dna technique included in method of making a...
C435S325000, C435S252300, C435S069100, C435S320100, C536S023500
Reexamination Certificate
active
06562596
ABSTRACT:
FIELD OF THE INVENTION
The present invention relates in general to metalloproteinase inhibitors and to polynucleotides encoding such factors. In particular, the invention relates to novel mammalian tissue inhibitors of metalloproteinase (herein designated as type three, or “TIMP-3”), to fragments, derivatives, and analogs thereof and to polynucleotides encoding the same. In another aspect, the present invention relates to novel methods of producing such compositions, and methods of using such compositions.
BACKGROUND OF THE INVENTION
Connective tissues are maintained in dynamic equilibrium by the opposing effects of extracellular matrix synthesis and degradation. The extracellular connective tissue matrix consists predominantly of collagens, with proteoglycans, fibronectin, laminin and other minor components making up the remainder.
Degradation of the matrix is brought about by the release of neutral metalloproteinases from resident connective tissue cells and invading inflammatory cells that are capable of degrading at physiological pH most of the matrix macromolecules. See Table 1, below. The proteinases include the mammalian tissue collagenases, gelatinases, and proteoglycanases; leukocyte collagenase and gelatinase (Murphy et al. Biochem. J. 283: 289-221 (1982); Hibbs et al., J. Biol. Chem. 260: 2493-2500 (1985)); macrophage collagenase and elastase (Werb et al. J. Exp. Med. 142: 346-360 (1975); Banda et al., Biochem. J. 193: 589-605 (1981)); and tumour collagenases (Liotta et al., PNAS-USA 76: 2268-2272 (1979); Liotta et al., Biochem. Biophys. Res. Commun. 98: 124-198 (1981); and Salo et al., J. Biol. Chem. 258: 3058-3063 (1983)). For a general review of collagenases and their role in normal and pathological connective tissue turnover see
Collagenase in Normal and Pathological Connective Tissues
, David E. Woolley and John M. Evanson, eds., John Wiley & Sons Ltd. (1988).
There are over five different collagen types (I, II, III, IV, V, etc.) which are differentially distributed among tissues. There is considerable homology and structural similarity among the various collagen types. Particular collagenases show some specificity for particular collagen types. See Table 1, below; Matrisian, Trends In Genetics 6: 121-125 (1990). With regard to inhibition of collagenases and other matrix-degrading metalloproteinases, it is possible that, depending on the actual enzymes, substrates, and inhibitory mechanisms, an inhibitor could act on just one, on several, or on all collagenases and metalloproteinases.
TABLE 1
MATRIX-degrading metalloproteinases
Name(s)
Size (kDa)
Degrades
Ref.
(1)
Interstitial collagenase
52 deduced
I, II, III collagen
Scholtz et al., Cancer Res. 48:5539-
(Type I collagenase)
52, 57 secreted
5545 (1988)
(MMP-1)
PMN Collagenase
75 secreted
I, II, III collagen
Macartney et al., Evr. J. Biochem.
(MMP-8)
130: 71-78 (1983).
(2)
72 kDA Type IV collagenase
72 secreted
IV, V, VII collagen,
Collier et al., J. Biol. Chem.
(72 kDa gelatinase)
fibronectin, gelatins
263:6579-6587 (1988)
(MMP-2)
92 kDa Type IV collagenase
78 deduced
IV, V collagen, gelatins
Withelm et al., J. Biol. Chem. 263:
(92 kDa gelatinase)
92 secreted
17213-17221 (1989)
(MMP-9)
(3)
Stromelysin
53 deduced
Proteoglycans, laminin, fibronectin,
Chin et al., J. Biol. Chem. 260:
(transin)
57, 60 secreted
III, IV, V collagen, gelatins
12367-12376 (1985)
(proteoglycanase)
(procollagen-activiating factor)
(MMP 3)
Stromelysin-2
53 deduced
III, IV, V collagen, fibronectin,
Nicholson et al., Biochemistry 28:
(transin-2)
gelatins
5195-5203 (1989)
(MMP-10)
PUMP-1
28 deduced
Gelatins, fibronectin
Quantin et al., Biochemistry 28:
(MMP-7)
28 secreted
5327-5333 (1989)
(Small metalloproteinase of uterus)
The matrix metalloproteinases are divided into three major subclasses, indicated with arabic numerals, on the basis of their substrate specificities.
The enzymes in each class are bold, and alternative names are shown in parentheses. MMP, matrix metalloproteinase; PMN, polymorphonuclear leukocyte.
The underlying basis of degradative diseases of connective tissue points to the matrix-specific metalloproteinases as having a fundamental role in the etiology of these diseases. Such diseases include dystrophic epidermolysis bullosa; rheumatoid arthritis; corneal, epidermal or gastric ulceration; peridontal disease; emphysema; bone disease; and tumor metastasis or invasion.
Most studies on connective tissue degradation and diseases involving such degradation have limited the measurement of metalloproteinases to collagenase (the most widely studied of this group of metalloproteinases). It is understood however, that the simultaneous effects of collagenase and the other matrix-degrading metalloproteinases will exacerbate the degradation of the connective tissue over that achieved by collagenase alone.
Specific natural inhibitors of collagenase were discovered in crude medium from cultured connective tissues. A metalloproteinase inhibitor known as TIMP (tissue inhibitor of metalloproteinases) has been studied with regard to physicochemical properties and the biochemistry of its interaction with collagenase, Murphy et al., J. Biochem. 195: 167-170 (1981); Cawston et al., J. Biochem. 211: 313-318 (1983); Stricklin et al., J. Biol. Chem. 258: 12252-12258 (1983), and DNA encoding it has been isolated, Docherty et al., Nature 318: 65-69 (1985); Carmichael et al., PNAS-USA 83: 2407-2411 (1986). In an in vitro cell culture model of tumor cell migration through a natural basement membrane, TIMP was able to arrest migration of a collagenase-secreting tumor cell line, Thorgeirsson et al., J. Natl. Canc. Inst. 69: 1049-1054 (1982). In vivo mouse lung colonization by murine B16-FlO melanoma cells was inhibited by injections of TIMP, Schultz et al., Cancer Research 48: 5539-5545 (1988). European Patent Publication No. EP O 189 784 also relates to TIMP.
McCartney et al., Eur. J. Biochem. 130: 79-83 (1983) reported the purification of a metalloproteinase inhibitor from human leukocytes.
DeClerck et al., Cancer Research 46: 3580-3586 (1986) described the presence of two inhibitors of collagenase in conditioned medium from bovine aortic endothelial cells.
Murray et al., J. Biol. Chem. 261: 4154-4159 (1986) reported the purification and partial amino acid sequence of a bovine cartilage-derived collagenase inhibitor.
Langley, et al., EP O 398 753 (“Metalloproteinase Inhibitor,” published November 22, 1990) discloses a novel metalloproteinase inhibitor and analogs, polynucleotides encoding the same, methods of production, pharmaceutical compositions, and methods of treatment. The polypeptide of
FIG. 2
therein has been referred to as TIMP-2, designating a molecule distinct from TIMP-1, supra. EP O 398 753 describes both bovine and human recombinant TIMP-2.
Staskus et al., J. Biol. Chem. 266: 449-454 (1991) reports a 21 kDa avian metalloproteinase inhibitor obtained from chicken fibroblasts. The authors note the biochemical similarities with other members of the TIMP and TIMP-2 group of proteins and state that the avian material may be a TIMP variant or may represent a third protein within the metalloproteinase inhibitor family. (This material is referred to herein as “ChIMP-3”)
Pavloff et al., J. Biol. Chem. 267: 17321-17326 (1992) discloses the cDNA and primary structure of a metalloproteinase inhibitor from chicken embryo fibroblasts.
Yang et al., PNAS-USA 89: 10676-10680 (1992) reports on the role of a 21 kDa protein chicken TIMP-3.
The present work relates to a third type of metalloproteinase inhibitor polypeptides. In one aspect, the present invention involves the cloning of recombinant human TIMP-3 nucleic acid and expression thereof.
SUMMARY OF THE INVENTION
According to the present invention, a class of novel tissue inhibitors of metalloproteinase are provided. For convenience, the present polypeptides are referred to as “TIMP-3,” as these polypeptides represent a new class of members of the tissue inhibitors of metalloproteinases. Also provided are DNA sequences coding for all or part of the present TIMP-3's, vectors containing su
Koski Raymond A.
Silbiger Scott M.
Amgen Inc.
Finnegan Henderson Farabow Garrett & Dunner LLP
Martinell James
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