Method and program for predicting gene network

Details Method and program for predicting gene network Method and program for predicting gene network

2011-03-29

2011-03-29

Clow, Lori A (Department: 1631)

Data processing: measuring, calibrating, or testing

Measurement system in a specific environment

Biological or biochemical

C702S020000

Reexamination Certificate

active

07917300

ABSTRACT:
A gene network is predicted which can prevent a decrease in the amount of basic data. A gene network is predicted by retrieving indirect causal relationships the presence of which cannot be explained on the basis of direct causal relationships and/or indirect causal relationships the presence of which can be explained on the basis of the direct causal relationships and supplementing a network comprising the direct causal relationships with the retrieved indirect causal relationships.

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Written Opinion of the International Searching Authority, filing date May 24, 2005.
Kyoda et al., “A Gene Network Inference Method from Continuous-Value Gene Expression Data of Wild-Type and Mutants.” Genome Informatics, vol. 11, pp. 196-204, (2000).
Masahiro Okamoto, “Development of the Inference System of Large Scale Genetic Networks.” The Japanese Society for Artificial Intelligence, pp. 7-14, Nov. 13, 2000.
Kyoda et al.“DBRF-MEGN Method: An Algorithm for Deducing Minimum Equivalent Gene Networks from Large-Scale Gene Expression Profiles of Gene Deletion Mutants.” Bioinformatics vol. 20, No. 16, pp. 2662-2675, (May 27, 2004).

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