Twin-arginine translocation in Bacillus

Chemistry: molecular biology and microbiology – Vector – per se

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C435S252300, C435S252310, C435S252330, C536S023400

Reexamination Certificate

active

07316924

ABSTRACT:
Described herein are methods to enhance protein secretion in a host cell. In preferred embodiment, the host cell is a gram-positive microorganism such as aBacillus. In another preferred embodiment, the host cell is a gram-negative microorganism. Preferably the gram-negative microorganism is anEscherichia colior a member of the genusPantoaea. Protein secretion may be enhanced by the overexpression of protein components of the Tat pathway. Alternatively, secretion of foreign proteins can be selectively enhanced by forming a chimeric polypeptide comprising a tat signal sequence and the protein of interest. In a preferred embodiment, the tat signal sequence is selected from phoD or LipA.

REFERENCES:
patent: 3817837 (1974-06-01), Rubenstein et al.
patent: 3850752 (1974-11-01), Schuurs et al.
patent: 3939350 (1976-02-01), Kronick et al.
patent: 3996345 (1976-12-01), Ullman et al.
patent: 4275149 (1981-06-01), Litman et al.
patent: 4277437 (1981-07-01), Maggio
patent: 4366241 (1982-12-01), Tom et al.
patent: 4816567 (1989-03-01), Cabilly et al.
patent: 0 444 759 (1991-09-01), None
patent: WO99/51753 (1999-10-01), None
patent: WO 02/055717 (2002-07-01), None
Jongbloed, Jan D. H. et al., << TatC is a Specificity Determinant for Protein Secretion via the Twin-arginine Translocation Pathway,>>Journal of Biological Chemistry, vol. 275, No. 52, pp. 41350-41357, Dec. 29, 2000.
Tjalsma, Harold et al., << Signal Peptide-Dependent Protein Transport inBacillus subtilis: a Genome-Based Survey of the Secretome,>>Microbiology and Molecular Biology, vol. 64, No. 3. pp. 515-547, Sep. 2000.
Van Dijl., Jan Maarten et al., << Functional genomic analysis of theBacillus subtilisTat Pathway for protein secretion,>>Journal of Biotechnology, pp. 243-254, Sep. 25, 2002.
Database EMBL, Blattner F.R. et al., << Hypothetical 11.3 KD Protein in UDP-RFAH Intergenic Region (TATA Protein), Database accession No. 065938, XP002133194.
Database EMBL, Sargent, F. et al., << TATB Protein,>> Database accession No. 069415, XP002133195.
Database EMBL, Sargent, F. et al., << Sec-Independent Protein Translocase Protein TATC,>> Database accession No. P27857, XP002133196.
Database EMBL, Daniels D. L. et al., << Deoxyribonuclease tatD,>> Database accession No. P27859, XP002227139.
Altschul el et al., “Gapped BLAST and PSI-BLAST: a new generation of protein database programs,” Nucl. Acids Res., vol. 25, pp. 3389-3402, 1997.
Antelmann et al., “Expression of a Stress—and Starvation-induced dps/pexB—Homologous Gene is Controlled by the Alternative Sigma Factor oBinBacillus Bacillus,” J. of Bacteriology, vol. 179, pp. 7251-7256, 1997.
Antelmann el al., “Phosphate Starvation-Inducible Proteins ofBacillus Bacillus: Proteomics and Transcriptional Analysis,” J. of Bacteriology, vol. 182, pp. 4478-4490, 2000.
Bakhiet et al., “Studies on Transfection and Transformation of Protoplasts ofBacillus larvae, Bacillus subtilis,andBacillus popilliae,” Applied and Environmental Microbiology, vol. 49, No. 3, pp. 577-581, Mar. 1985.
Benton et al., “Steering Λgt Recombinant Clones by Hybridization to Single Plaques in situ,”Science, vol. 196, No. 4286, pp. 180-182, Apr. 8, 1977.
Berger and Kimmel, Guide to Molecular Cloning Techniques, Methods in Enzymology, vol. 152, Academic Press, San Diego, CA (1987).
Berks B., “A common export pathway for proteins binding complex redox cofactors,” Mol Microbiol. vol. 22, pp. 393-404, 1996.
Berks et al., “The Tat protein export pathway,” Mol Microbiol. vol. 35, pp. 260-274, 2000.
Bernhardt et al., “Specific and general stress proteins inBacillus subtilis—a two-dimensional protein electrophoresis study,” Microbiol. vol. 143, pp. 999-1017, 1997.
Blum et al., “Improved silver staining of plant proteins, RNA and DNA in polyacrylamid gels,” Electrophoresis, vol. 8, pp. 93-99, 1987.
Bogsch et al., “Pathway specificity for a ΔpH-dependent precursor thylakoid lumen protein is governed by a ‘Sec-avoidance’ motif in the transfer peptide and a ‘Sec-incompatible’ mature protein,”EMBO, vol. 16, pp. 3851-3859, 1997.
Bogsch et al., “An Essential Component of a Novel Bacterial Protein Export System with Homologues in Plastids and Mitochondria,” J. Biol. Chem., vol. 273, pp. 18003-18006, 1998.
Bolhuis et al., “Evaluation of Bottlenecks in the Late Stages of protein Secretion inBacillus subtillis,” App. Environ. Microbiol. vol. 65, pp. 2934-2941, 1999.
Bolhuis et al., “Different Mechanisims for Thermal inactivation ofBacillus subtilisSignal Mutants,” J. Biolog. Chem., vol. 274, pp. 15865-15868, 1999.
Bolhuis et al., “Bacillus subtilis, can modulate its capacity and specificity for protein secretion through temporally controlled expression of theslpSgene for signal peptidase I” Mol. Microbiol. vol. 22, pp. 605-618, 1996.
Brink et al., “Targeting of thylakoid proteins by the ΔpH-driven twin-arginine translocation pathway requires a specific signal in the hydrophobic domain in conjunction with the twin-arginine motif,” FEBS Letters, vol. 434, pp. 425-430, 1998.
Bron et al., “Construction and Characterization of a Transformable Eightfold Auxotrophic Strain and two Ultraviolet-Sensitive Derivatives,” Mutation Research, vol. 15, pp. 1-10, 1972.
Chaddock et al., “A new type of signal peptide: central role of a twin- arginine motif in transfer signals for the ΔpH-dependent thylakoid protein translocase,”EMBO, vol. 14, pp. 2715-2722, 1995.
Chanal et al., “MicroCorrespondence,” Molec. Microbiol. vol. 30, pp. 673-678, 1998.
Chang et al., “High Frequency Transformation ofBacillus subtilisProtoplasts by Plasmid DNA,”Molec. Gen. Genet.vol. 168, pp. 111-115, 1979.
Coombs, J.,Dictionary of Biotechnology, Stockton Press, New York, N.Y., 1994.
Contente et al., “Marker Rescue Transformation by Linear Plasmid DNA inBacillus subtilis,” Plasmid, vol. 2, pp. 555-571, 1979.
Cristobal et al., Competition between Sec- and TAT-dependent protein translocation inEscherichia coli, EMBO, vol. 18 pp. 2982-2990, 1999.
Cserzo et al., “Prediction of transmembrane α-helices in prokaryotic membrane proteins: the dense alignment surface method,” Protein Engin. vol. 10 pp. 673-676, 1997.
Dalbey et al., “Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane,” TIBS, vol. 24, pp. 17-21, 1999.
*Dieffenbach et al.,PCR Primer, a Laboratory Manual, Cold Springs Harbor Press, Plainview, N.Y., 1995.
Donovan et al., “Genes Encoding Spore Coat Polypeptides fromBacillus subtilis,” J. Mol. Biol., vol. 196, pp. 1-10, 1987.
Eder et al., “Bacillus subtillissecreted phosphodi esterase/alkaline phosphatase in the product of a Pho regulon gene, phoD,” Microbiology, vol. 142, pp. 2041-2047, 1996.
Eymann et al., “Phosphate-starvation-inducible proteins inBacillus subtilis: a two-dimensional gel electrophoresis study,” Microbiology, vol. 142, pp. 3163-3170, 1996.
Fischer et al., “Introduction of plasmid pC194 intoBacillus thuringiensisby Protoplast transformation and plasmid transfer,”Archives of Microbiology, vol. 139, pp. 213-217, 1984.
*Glover, D. M. (ed), DNA Cloning: A Practical Approach, MRL Press, Ltd., Oxford, U. K. vol. I, II.
Grunstein et al., “Colony hybridization: A method for the isolation of cloned DNAs that contain a specific gene,”Proc. Nat. Acad. Sci. USA, vol. 72, No. 10, pp. 3961-3965, Oct. 1975.
Haima, Peter et al., “Novel plasmid marker rescue transformation system for molecular cloning inBacillus subtilisenabling direct selection of recombinants,”Mol. Gen. Genet.vol. 223, pp. 185-191, 1990.
*Hale & Marham, The Harper Collins Di

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Twin-arginine translocation in Bacillus does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Twin-arginine translocation in Bacillus, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Twin-arginine translocation in Bacillus will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-2798808

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.