Target nucleic acid sequence amplification

Chemistry: molecular biology and microbiology – Micro-organism – tissue cell culture or enzyme using process... – Preparing compound containing saccharide radical

Patent

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

435 6, 536 231, 536 243, 935 76, 935 77, 935 78, C12P 1934, C12Q 168, C07H 2102, C12N 1500

Patent

active

060636041

ABSTRACT:
A method is provided for the rapid, substantially isostatic, segregation and amplification of the sequence information of a target nucleic acid sequence positioned within a single- or double-stranded polynucleotide. The method is based on the serial generation of double-stranded DNA engineered to contain terminal nicking sites, nicking of those sites, and extensions from those nicks, thereby displacing any existing polynucleotides. Further provided is a method for detecting polynucleotides using the method of the invention. A kit combining the components commonly used in practicing the method of the invention is also provided.

REFERENCES:
patent: 4683195 (1987-07-01), Mullis et al.
patent: 4683202 (1987-07-01), Mullis
patent: 4800159 (1989-01-01), Mullis et al.
patent: 5130238 (1992-07-01), Malek et al.
patent: 5270184 (1993-12-01), Walker et al.
patent: 5310652 (1994-05-01), Gelfand et al.
patent: 5399491 (1995-03-01), Kacian et al.
patent: 5407800 (1995-04-01), Gelfand et al.
patent: 5409818 (1995-04-01), Davey et al.
patent: 5422252 (1995-06-01), Walker et al.
patent: 5455166 (1995-10-01), Walker
patent: 5459055 (1995-10-01), Jendrisak et al.
patent: 5470723 (1995-11-01), Walker et al.
patent: 5480784 (1996-01-01), Kacian et al.
patent: 5518884 (1996-05-01), Spears et al.
patent: 5523204 (1996-06-01), Singer et al.
patent: 5536649 (1996-07-01), Fraiser et al.
patent: 5547861 (1996-08-01), Nadeau et al.
patent: 5550025 (1996-08-01), Walker
patent: 5591609 (1997-01-01), Auerbach
patent: 5593867 (1997-01-01), Walker et al.
patent: 5620869 (1997-04-01), Woodard et al.
patent: 5624825 (1997-04-01), Walker et al.
patent: 5631147 (1997-05-01), Lohman et al.
patent: 5641633 (1997-06-01), Linn et al.
patent: 5648211 (1997-07-01), Fraiser et al.
patent: 5667994 (1997-09-01), Dilly et al.
patent: 5744311 (1998-04-01), Fraiser et al.
The Stratagene Catalog p. 38-39 (1988).
Barany, "The Ligase Chain Reaction in a PCR World", PCR Methods and Appl., 1:5-16 (1991).
Boyd, et al., "A human BRCA1 gene knockout", Nature, 375:541-542 (1995).
Castilla, et al., "Mutations in the BRCA1 gene in families with early-onset breast and ovarian cancer", Nature Genet., 8:387-391 (1994).
Easton, et al., "Breast and Ovarian Cancer Incidence in BRCAI-Mutation Carriers", A,. J. Hum. Genet., 56:265-271 (1995).
Fleischmann, et al., "Whole-Genome Random Sequencing and Assembly of Haemophilus influenzae Rd", Science, 269:496-512 (1995).
Ford, et al., "The genetics of breast and ovarian cancer", Brit. J. Cancer, 72:805-812 (1995).
Friedman et al., "Confirmation of BRCA1 by analysis of germline mutations linked to breat and ovarian cancer in ten families", Nature Genet., 8:399-404 (1994).
Guatelli, et al., "Isothermal, in vitro amplification of nucleic acids by a multienzyme reaction modeled after retroviral replication", Proc. Natl. Acad. Sci. (USA), 87:1874-1878 (1990).
Kievits, et al., "NASBA.TM. isothermal enzymatic in vitro nucleic acid amplification optimized for the diagnosis of HIV-1 infection", J. Virol. Methods, 35:273-286, (1991).
Kwoh, et al., "Transcription-based amplification system and detection of amplified human immunodeficiency virus type 1 with a bead-based sandwich hybridization format", Proc. Natl. Acad. Sci. (USA), 86:1173-1177, (1989).
Myers, et al., "Reverse Transcription and DNA Amplification by Thermus thermophilus DNA Polymerase", Biochemistry, 30:7661-7666, (1991).
Nowak, "Discovery of AT Gene Sparks Biomedical Research Bonanza", Science, 268:1700-1701 (1995).
Saiki, et al., "Primer-Directed Enzymatic Amplification of DNA with a Thermostable DNA Polymerase", Science, 239:487-491 (1998).
Savitsky, et al., "A Single Ataxia Telangiectasia Gene with a Product Similar to PI-3 Kinase", Science, 268:1749-1753 (1995).
Shattuck-Eidens, et al., "A Collaborative Survey of 80 Mutations in the BRCA1 Breast and Ovarian Cancer Susceptibility Gene", J.A.M.A., 273:535-541 (1995).
Simard, et al., "Common origins of BRCA1 mutations in Canadian breast and ovarian cancer families", Nature Genet., 8:392-398 (1994).
Spargo, et al., Abstract, "Thermophilic Strand Displacement Amplification" (undated).
Veres, et al., "The Molecular Basis of the Sparse Fur Mouse Mutation", Science, 237:415-417 (1987).
Walker, et al., "Strand displacement amplification--an isothermal, in vitro DNA amplification technique", Nucl. Acids Res., 20:1691-1696 (1992).
Walker, et al., "Isothermal in vitro amplification of DNA by a restriction enzyme/DNA polymerase system", Proc. Natl. Acad. Sci. (USA), 89:392-396 (1992).
Walker, et al., "Multiplex strand displacement amplification (SDA) and detection of DNA sequences from Mycobacterium tuberculosis and other mycobacteria", Nucl. Acids Res., 22:2670-2677 (1994).
Walker, "Empirical Aspects of Strand Displacement Amplification", PCR Methods and Appl., 3:1-6 (1993).
Walter, et al., "Strand displacment amplification as an in vitro model for rolling-circle replication: Deletion formation and evolution during serial transfer", Proc. Natl. Acad. Sci. (USA), 91:7937-7941 (1994).
Wu, et al., "The Ligation Amplification Reaction (LAR)--Amplification of Specific DNA Sequences Using Sequential Rounds of Template-Dependent Ligation", Genomics 4:560-569 (1989).
Zwadyk, Jr., et al., "Rendering of Mycobacteria Safe for Molecular Diagnostic Studies and Development of a Lysis Method for Strand Displacement Amplification and PCR", J. Clin. Microbiol., 32:2140-2146 (1994).

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Target nucleic acid sequence amplification does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Target nucleic acid sequence amplification, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Target nucleic acid sequence amplification will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-257861

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.