System and method for providing flexible access and...

Details System and method for providing flexible access and... System and method for providing flexible access and...

2005-07-19

2005-07-19

Martinell, James (Department: 1634)

Data processing: measuring, calibrating, or testing

Measurement system in a specific environment

Biological or biochemical

C702S020000

Reexamination Certificate

active

06920396

ABSTRACT:
A system and method for providing flexible access and retrieval of sequence data from a plurality of biological data repositories is described. A plurality of biological data repositories are maintained. Each data repository contains sequence data stored into structured records uniquely identified. Each data repository is interfaced through a queue handler dynamically locating and selecting at least one such biological data repository and launching a search query against each selected biological data repository. Search query parameters are accepted from a user specifying a search request for a sequence set. Results obtained from a search engine are presented as ordered tables of search results.

REFERENCES:
MPSRCH Suite of Database Searching Programs, Version 2.0, User/Reference Manual (IntelliGenetics, Inc. 1994).
“Oracle 9i Application Server,” A Technical White Paper [online], Nov. 2000 [retrieved on Jun. 17, 2003] Retrieved from the Internet:<URL: http://technet.oracle.com/products/ias/pdf/9ias_102.pdf>.
“Oracle 9i Application Server,” Overview Guide, Release 1.0.2. [online], Nov. 2000 [retrieved on Nov. 12, 2003]. Retrieved from the Internet:<URL: http;//downoad.oracle.com/docs/cds/a97335_01.zip>.
Stabenau, Arne et al., “A guided Tour of Ensembl,” European Bioinformatics Institute, 2001, www.ensemble.orgl.
Altschul, Stephan, “Blast Overview,” 2001, www.ensemble.orgl.

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