Synthetic DNA encoding an orange seapen-derived green...

Chemistry: natural resins or derivatives; peptides or proteins; – Proteins – i.e. – more than 100 amino acid residues

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

Reexamination Certificate

active

07045599

ABSTRACT:
Synthetic versions of a full length and termini truncated humanized green fluorescent protein based onPtilosarcus gurneyiare disclosed which have been modified to the favored or most favored codons for mammalian expression systems. The disclosed encoded protein has 239 amino acid residues compared with the wild typePtilosarcus gurneyiwhich has 238 amino acids. In the present invention, a valine residue has been added at the second position from the amino terminus and codon preference bias has been changed in a majority of the wild type codons ofPtilosarcus gurneyifluorescent protein. The humanizedPtilosarcus gurneyigreen fluorescent protein is useful as a fluorescent tag for monitoring the activities of its fusion partners using imaging based approaches.

REFERENCES:
patent: 5401629 (1995-03-01), Harpold et al.
patent: 5436128 (1995-07-01), Harpold et al.
patent: 5491084 (1996-02-01), Chalfie et al.
patent: 5786464 (1998-07-01), Seed
patent: 5795737 (1998-08-01), Seed et al.
patent: 5874304 (1999-02-01), Zolotukhin et al.
patent: 5968750 (1999-10-01), Zolotukhin et al.
patent: 6232107 (2001-05-01), Bryan et al.
Barber, K., et al., Delivery of membrane-impermeant fluorescent probes into living neural cell populations by lipotransfer, Neuroscience Letters 207 (1996) 17-20, Elsevier Science Ireland Ltd. Publ.
Brejc, K., et al., Structural basis for dual excitation and photoisomerization of the Aequorea victoria green fluorescent protein, Proc. Natl. Acad. Sci. USA vol. 94, pp. 2306-2311, Mar. 1997 Biophysics, The National Academy of Sciences of the USA Publ.
Bright, G., et at., Delivery of Macromolecules Into Adherent Cells via Electroporation for Use in Fluorescence Spectroscopic Imaging and Metabolic Studies, Cytometry 24:226-233 (1996), Wiley-Liss, Inc. Publ.
Barak, L., et al., A B-Arrestin/Green Fluorescent Protein Biosensor for Detecting G Protein-coupled Receptor Activation, The Journal of Biological Chemistry, vol. 272 No. 44, Issue of Oct. 31, pp. 27497-27500 (1997), The American Society for Biochemistry and Molecular Biology, Inc. Publ.
Chalfie, M., et al., Green Fluorescent Protein as a Marker for Gene Expression, Science vol. 263, pp. 802-805, Feb. 11, 1994.
Cheng, L. et al., Use of green fluorescent protein variants to monitor gene transfer and expression in mammalian cells, Research Division SyStemix, Inc. Palo Alto, CA 94304, Oncology Ressearch Laboratories, The Toronto Hospital and Department of Medical Biophysics, Univeristy of Toronto, Toronto, Ontario M5G2M1, Canada, Feb. 23, 1996.
Cubitt, A. et al., Understanding, improving and using green fluorescent proteins, TIBS 20—Nov. 1995, pp. 448-455, Elsevier Science Ltd.
Davis, I., et al., A Nuclear GFP That Marks Nuclei in Living Drosophila Embryos; Maternal Supply Overcomes a Delay in Appearance of Zygotic Fluorescence, Developmental Biology 170, 726-729 (1995), Academic Press, Inc. Publ.
Ehrig, T., et al., Green-fluorescent protein mutants with altered fluorescence excitation spectra, FEBS Leters 367 (1995) 163-166, Federation of European Biochemical Societies Publ.
Giuliano, K.; et al., Fluorescent Protein Biosensors: Measurement of Molecular Dynamics in Living Cells, Annu. Rev. Biophys. Biomol. Struct. (1995) 24:405-34, Annual Reviews Inc. Publ.
Giuliano, K.A, and Taylor, D. L., Light-Optical-Based Reagents for the Measurement and Manipulation of Ions, Metabolites, and Macromolecules in Living Cells, Methods in Neurosciences, vol. 27, pp. 1-16 (1995), Academic Press Inc., Publ., San Diego , California, USA.
Haas, J., Codon usage limitation in the expression of HIV-1 envelope glycoprotein, Current Biology (1996), vol. 6 No. 3:315-324, Current Biology Ltd. Publ.
Haseloff, J., et al., Removal of a cryptic intron and subcellular localization of green fluorescent protein are required to mark transgenic Arabidopsis plants brightly, Proc. Natl. Acad. Sci. USA vol. 94, pp. 2122-2127, Mar. 1997 Applied Biological Sciences, The National Academy of Sciences of the USA Publ.
Hastings, W. Bioluminescence, Chapter 48 in Cell Physiology Source Book, Ed. By Nicholas Sperelakis, pp. 665-681, (1995) Academic Press, Inc. Publ., San Diego, California, USA.
Hauser, Karin, et al, Expression of the green fluorescent protein inParamecium tetraurelia, European Journal of Cell Biology, vol. 79, pp. 144-149, Feb. 2000, Urban & Fischer Verlag.
Heim, R., et al., Engineering green fluorescent protein for improved brightness, longer wavelengths and fluorescence resonance energy transfer, Current Biology 1996; 6:178-182, Current Biology Ltd., Publ.
Jones, J. et al., Development and Application of a GFP-FRET Intracellular Caspase Assay for Drug Screening., Journal of Biomolecular Screening, vol. 5, No. 5, pp. 307-318 (2000), The Society for Biomolecular Screening Publ., San Diego, California, USA.
McNeil, P., Incorporation of Macromolecules into Living Cells, Methods in Cell Biology, vol. 29, pp. 153-173 (1989) Academic Press, Inc. Publ.
Miyawaki, A., et al., Fluorescent indicators for Ca2+based on green fluorescent proteins and calmodulin, Nature, vol. 388, pp. 882-887, Aug. 28, 1997, Macmillan Publishers Ltd. (1997) Publ.
Morise, H. et al, Intermolecular Energy Transfer in the Bioluminescent System of Aequorea, Biochemistry, vol. 13, No. 12, pp. 2656-2662 (1974).
Kaether, C. et al., Visualization of protein transport along the secretory pathway using green fluorescent protein, FEBS Letters 369 (1995) 267-271, Federation of European Biochemical Societies Publ.
Hu, W., et al., Expression of Aequorea green fluorescent protein in plant cells, FEBS Letters 369 (1995) 331-334, Federation of European Biochemical Societies Publ.
Southwick, P., et al., Cyanine Dye Labeling Reagents-Carboxymethylindocyanine Succinimidyl Esters, Cytometry 11:418-430 (1990), Wiley-Lisa, Inc. Publ.
Tsien, R., Fluorescent Indicators of Ion Concentrations, Methods In Cell Biology, Ch. 5, pp. 127-156 (1989), Academic Press, Inc. Publ.
Wang, Y., et al., Fluorescent Analog Cytochemistry: Tracing Functional Protein Components in Living Cells, Methods in Cell Biology, vol. 29, pp. 1-12 (1989) Academic Press, Inc. Publ.
Ward, W., et al., Reversible Denaturation of Aequorea Green-Fluorescent Protein: Physical Separation and Charaterization of the Renatured Protein, Biochemistry 1982, 21, 4535-4540, (1982) American Chemical Society Publ.
Ward, W., et al., Spectrophotometric Identity of the Energy Transer Chromophores in Renilla and Aequorea Green-Fluorescent Proteins, Photochemistry and Photobiology, vol. 31, pp. 611 to 615, (1980) Pergamon Press Ltd Publ.
Ward, W., Ch. 7: General Aspects of Bioluminescence, Chemi- and Bioluminescence, pp. 321-358, Edited by John G. Burr, (1985) Marcel Dekker, Publ., New York, New York.
Waud, J., et al., Measurement of proteases using chemiluminescence-resonance-energy-transfer chimaeras between green fluorescent protein and aequorin, Biochem J. (2001) 357, 687-697 Biochemical Society Publ.
Johnson, F.H., Luminescence, Narcosis, and Life In The Deep Sea, Vantage Press, 1st Ed., pp. 50-57 (1988).
Rizzuto, R., et al., Rapid changes of mitochondrial Ca2revealed by specifically targeted recombinant aequorin, Nature, vol. 358, pp. 325-327, Jul. 23, 1992.
Zolotukhin, Sergei, et al., A “Humanized” Green Fluorescent Protein cDNA Adapted for High-Level Expression in Mammalian Cells, Journal of Virology, vol. 70, No. 7, pp. 4646-4654, Jul. 1996, American Society for Microbiology.
Peelle, Beau, et al., Characterization and Use of Green Fluorescent Proteins fromRenilla mulleriandPtilosarcus guernyifor the Human Cell Display of Functional Peptides, Journal of Protein Chemistry, vol. 20, No. 6, Aug. 2001, Plenum Publishing Corporation.
Chiu, Wan-ling, et al. Engineered GFP as a Vital Reporter in Plants, Current Biology, vol. 6, No. 3, pp. 325-330, 1996, Cell Press.

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Synthetic DNA encoding an orange seapen-derived green... does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Synthetic DNA encoding an orange seapen-derived green..., we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Synthetic DNA encoding an orange seapen-derived green... will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-3625415

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.