Species-specific, genus-specific and universal DNA probes...

Details Species-specific, genus-specific and universal DNA probes... Species-specific, genus-specific and universal DNA probes...

2006-05-02

2011-11-29

Lu, Frank W (Department: 1634)

Chemistry: molecular biology and microbiology

Micro-organism, tissue cell culture or enzyme using process...

Preparing compound containing saccharide radical

C435S006120, C435S007200, C435S091100, C536S023100, C536S023700, C536S023740, C536S024300, C536S024330

Reexamination Certificate

active

08067207

ABSTRACT:
Embodiments disclosed herein relate to methods and compositions for species-specific detection of bacterial and fungal nucleic acids and nucleic acids of antibiotic resistance genes.

REFERENCES:
patent: 4816389 (1989-03-01), Sonsonetti et al.
patent: 5030556 (1991-07-01), Beaulieu et al.
patent: 5041372 (1991-08-01), Lampel et al.
patent: 5084565 (1992-01-01), Parodos et al.
patent: 5089386 (1992-02-01), Stackebrandt et al.
patent: 5162199 (1992-11-01), Stern et al.
patent: 5232831 (1993-08-01), Milliman et al.
patent: 5292874 (1994-03-01), Milliman
patent: 5298392 (1994-03-01), Atlas et al.
patent: 5334501 (1994-08-01), Adams et al.
patent: 5389513 (1995-02-01), Baquero et al.
patent: 5401631 (1995-03-01), Lane et al.
patent: 5437978 (1995-08-01), Ubikata et al.
patent: 5472843 (1995-12-01), Milliman
patent: 5476929 (1995-12-01), Briles et al.
patent: 5523205 (1996-06-01), Cossart et al.
patent: 5523217 (1996-06-01), Lupski et al.
patent: 5541308 (1996-07-01), Hogan et al.
patent: 5574145 (1996-11-01), Barry et al.
patent: 5595874 (1997-01-01), Hogan et al.
patent: 5599665 (1997-02-01), Barbieri et al.
patent: 5627275 (1997-05-01), Roll
patent: 5652102 (1997-07-01), Fratamico et al.
patent: 5708160 (1998-01-01), Goh et al.
patent: 5866336 (1999-02-01), Nazarenko et al.
patent: 5994066 (1999-11-01), Bergeron et al.
patent: 6001564 (1999-12-01), Bergeron et al.
patent: 6037130 (2000-03-01), Tyagi et al.
patent: 6582908 (2003-06-01), Fodor et al.
patent: 6610836 (2003-08-01), Breton et al.
patent: 2003/0180733 (2003-09-01), Bergeron et al.
patent: 2004/0185478 (2004-09-01), Bergeron et al.
patent: 2005/0042606 (2005-02-01), Bergeron et al.
patent: 2007/0009947 (2007-01-01), Bergeron et al.
patent: 2007/0105129 (2007-05-01), Bergeron et al.
patent: 2009/0047671 (2009-02-01), Bergeron et al.
patent: 2009/0053702 (2009-02-01), Bergeron et al.
patent: 2009/0053703 (2009-02-01), Bergeron et al.
patent: 2009/0068641 (2009-03-01), Bergeron et al.
patent: 2010/0267012 (2010-10-01), Bergeron et al.
patent: 2052822 (1992-04-01), None
patent: 0 133 288 (1985-02-01), None
patent: 0 133 671 (1985-03-01), None
patent: 0 272 009 (1988-06-01), None
patent: 0 277 237 (1988-08-01), None
patent: 0 297 291 (1989-01-01), None
patent: 0 377 896 (1989-10-01), None
patent: 0 364 255 (1990-04-01), None
patent: 0 438 115 (1991-07-01), None
patent: 0 466 251 (1992-01-01), None
patent: 0 527 628 (1993-02-01), None
patent: 0 577 523 (1994-01-01), None
patent: 0 630 973 (1994-12-01), None
patent: 0 652 291 (1995-05-01), None
patent: 0 695 803 (1996-02-01), None
patent: 0 761 815 (1997-03-01), None
patent: 0 786 519 (1997-07-01), None
patent: 0 804 616 (1997-11-01), None
patent: 2584419 (1987-01-01), None
patent: 2599743 (1987-12-01), None
patent: 2636075 (1990-03-01), None
patent: 2685334 (1993-06-01), None
patent: 2686604 (1993-07-01), None
patent: 2699539 (1994-06-01), None
patent: 6-54700 (1994-03-01), None
patent: 6-90798 (1994-04-01), None
patent: 6-165681 (1994-06-01), None
patent: 7-67657 (1995-03-01), None
patent: 7-209294 (1995-08-01), None
patent: WO 90/14444 (1990-11-01), None
patent: WO 91/08305 (1991-06-01), None
patent: WO 91/11531 (1991-08-01), None
patent: WO 91/16454 (1991-10-01), None
patent: WO 91/18926 (1991-12-01), None
patent: WO 92/03455 (1992-03-01), None
patent: WO 92/11273 (1992-07-01), None
patent: WO 92/14488 (1992-09-01), None
patent: WO 93/03186 (1993-02-01), None
patent: WO 93/12245 (1993-06-01), None
patent: WO 94/02645 (1994-02-01), None
patent: WO 94/17205 (1994-08-01), None
patent: WO 95/00650 (1995-01-01), None
patent: WO 95/09025 (1995-04-01), None
patent: WO 95/20055 (1995-07-01), None
patent: WO 96/00298 (1996-01-01), None
patent: WO 96/02648 (1996-02-01), None
patent: WO 96/08582 (1996-03-01), None
patent: WO 96/18745 (1996-06-01), None
patent: WO 98/20157 (1998-05-01), None
patent: WO 99/24059 (1999-05-01), None
patent: WO 00/14274 (2000-03-01), None
patent: WO 01/23604 (2001-04-01), None
patent: WO 2004/055205 (2004-07-01), None
Aminov et al. (1996), Cloning, sequencing and complementation analysis of therecA gene fromPrevotella ruminicola, FEMS Microbiology Letters 144:53-59.
An, G. and Friesen, J.D. (1980), The nucleotide sequence of tufB and four nearby tRNA structural genes ofEscherichia coli, Gene 12:33-39.
Andersson, Siv. G.E. (1995), Unusual organization of the rRNA genes inRickettsia prowazekii, Journal of Bacteriology 177(14):4171-4175.
Berg et al. (1996), Development of an amplification and hybridization assay for the specific and sensitive detection ofMycoplasma fermentansDNA, Molecular and Cellular Probes 10:7-14.
Birnboim, H.C. and Doly, J. (1979), A rapid alkaline extraction procedure for screening recombinant plasmid DNA, Nucleic Acids Research 7(4):1513-1523.
Bremaud, L. et al. (1995), Genetic and molecular analysis of the tRNA-tufB operon of the myxobacteriumStigmatella aurantiaca, Nucleic Acids Research 23(10):1737-1743.
Brisson-Noël, et al. (1988), Evidence for natural gene transfer from gram-positive cocci toEscherichia coli, Journal of Bacteriology 170(4)1739-1745.
Carlin, N.I.A. et al. (1992), Monoclonal antibodies specific for elongation factor Tu and complete nucleotide sequence of the tuf gene inMycobacterium tuberculosis, Infection and Immunity 60(8):3136-3143.
Chamberland, S. et al. (1992), Antibiotic susceptibility profiles of 941 gram-negative bacteria isolated from septicemic patients throughout Canada, Clinical Infectious Diseases 15:615-628.
Croizé, J. (1995), Les méthodes automatisées d'identification des bactéries à l'aube de 1995, La Lettre de l'Infectiologue 10(4):109-113.
Designer PCR, the advertisement from Research Genetics. Nucleic Acids Res. 22(15), Aug. 11, 1994.
Dieffenbach, C.W. and Dveksler, G.S., Eds. (1995), PCR Primer: A Laboratory Manual, Cold Spring Harbor Laboratory Press, pp. 133-155.
Dutka-Malen, S. et al. (1992), Sequence of the vanC gene ofEnterococcus gallinarumBM 4174 encoding a D-alanine:D-alanine ligase-related protein necessary for vancomycin resistance, Gene 112:53-58.
East, A.K. and Dyke, K.G.H. (1989), Cloning and sequence determination of sixStaphylococcus aureusbeta-Lactamases and their expression inEscherichia coliandStaphylococcus aureus, Journal of General Microbiology 135:1001-1015.
Ehrlich, G.D. and Greenberg, S.J. (1994), PCR-based diagnosis in infectious disease, Blackwell Scientific Publications, pp. 3-18 and 665-687.
Emori, T.G. and Gaynes, R.P. (1993), An overview of nosocomial infections, including the role of Microbiology Laboratory, Clinical Microbiology Reviews 6(4):428-442.
Evers, S. et al. (1994), Sequence of the vanB and ddl genes encoding D-alanine:D-lactate and D-alanine:D-alanine ligases in vancomycin-resistantEnterococcus faecalisV583, Gene 140:97-102.
Eykyn, S.J. et al. (1990), The causative organisms of septicaemia and their epidemiology, Journal of Antimicrobial Chemotherapy 25(Suppl. C):41-58.
Fani, R. et al. (1993), Use of random amplified polymorphic DNA (RAPD) for generating specific DNA probes for microorganisms, Molecular Ecology 2:243-250.
Fleischmann, R.D. et al. (1995), Whole-genome random sequencing and assembly ofHaemophilus influenzaeRd, Science 269:496-498, 507-512.
Flores, N. et al. (1992), Recovery of DNA from agarose gels stained with Methylene Blue, Biotechniques 13(2):203-205.
Kamla, V. (1994), Database Empro, EMBL, AC:Z34275.
Kellogg, D.E. et al. (1994), TaqStart antibody: “Hot Start” PCR facilitated by a neutralizing monoclonal antibody directed against TaqDNA polymerase, BioTechniques 16(6):1134-1137.
Koenig, C. et al. (1992), Analyses of the Flash Track DNA Probe and UTIscreen bioluminescence tests for bacteriuria, Journal of Clinical Microbiology 30(2):342-345.
Kwok, S. and Higuchi, S. (1989). “Avoiding false positive with PCR.” Nature 339:237-238.
Lee, H.H., Morse, S.A. and Olsvik, O., Eds. (1997), Nucleic Acid Amplification Technologies: Application to Disease Diagnosis, Biotechniques Books, Div. Eaton Publishing, p. 7.
Lewin, B. (1990), Genes IV, Oxford University Press, pp. 497-517.
Loechel, S.

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