Significance measure of structured clusters

Details Significance measure of structured clusters Significance measure of structured clusters

2011-04-12

2011-04-12

Brusca, John S (Department: 1631)

Data processing: measuring, calibrating, or testing

Measurement system in a specific environment

Biological or biochemical

C365S094000, C700S001000

Reexamination Certificate

active

07925447

ABSTRACT:
The exemplary embodiments provide a computer implemented method, apparatus, and computer usable program code for calculating a probability. An input is received, wherein the input comprises a PQ tree. The leaf nodes of the PQ tree are counted to form a number of leaf nodes. A factorial value of the number of leaf nodes is calculated to form a denominator. A hash value of a frontier of all permutations of the PQ tree is calculated to form a numerator. A ratio of the numerator to the denominator is determined to form a result. The result is displayed to a user.

REFERENCES:
Landau et al. Gene Proximity Analysis across Whole Genomes via PQ Trees Journal of Computational Biology, vol. 12, pp. 1289-1306 (2005).

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