Separation of phosphorothioate oligonucleotides by capillary gel

Organic compounds -- part of the class 532-570 series – Organic compounds – Carbohydrates or derivatives

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536 261, 536 2672, C07H 106, C07H 2104, C07H 1910, C07H 1920

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054202655

ABSTRACT:
A method for separating a mixture of 5'-phosphorothioate mononucleotides, a mixture of 5'-phosphorothioate oligonucleotides, or a mixture of both 5'-phosphorothioate mononucleotides and 5'-phosphorothioate oligonucleotides comprising electro- phoresis through a gel of at least 12% polymerized linear acrylamide containing at least 50% formamide or other denaturing organic solvent. This method can resolve phosphorothioate oligonucleotides differing by only a single base. Samples of less than 1 nanogram in microliter volumes can be conveniently handled.

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