Prostate cancer gene

Organic compounds -- part of the class 532-570 series – Organic compounds – Carbohydrates or derivatives

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C536S024300, C536S024310, C536S024330, C435S006120

Reexamination Certificate

active

09901484

ABSTRACT:
The present invention relates to PG1, a gene associated with prostate cancer. The invention provides polynucleotides including biallelic markers derived from PG1 and from flanking genomic regions. Primers hybridizing to these biallelic markers and regions flanking are also provided. This invention provides polynucleotides and methods suitable for genotyping a nucleic acid containing sample for one or more biallelic markers of the invention. Further, the invention provides methods to detect a statistical correlation between a biallelic marker allele and prostate cancer and between a haplotype and prostate cancer. The invention also relates to diagnostic methods of determining whether an individual is at risk for developing prostate cancer, and whether an individual suffers from prostate cancer as a result of a mutation in the PG1 gene.

REFERENCES:
patent: 5807680 (1998-09-01), Sutcliffe et al.
patent: WO 96/20288 (1996-07-01), None
patent: WO 97/36535 (1997-10-01), None
patent: WO 97/46702 (1997-12-01), None
Schena et al, “Parallel human genome analysis, microarray based expression monitoring of 1000 genes”, Proc. Natl. Acad. Science. (1996) 93:10614-10619.
Capecchi, “Altering the genome by homologous recombination” (Science(1989) 244:1288-1292).
Genbank Accession No. N39909 (Jan. 22, 1996).
Genbank Accession No. R96921 (Sep. 11, 1995).
Genbank Accession No. H061164 (Jun. 21, 1995).
Gu et al (Proc. Natl. Acad. Sci. (1991) 88:5867-5871).
Genbank Accession No. M68941 (Apr. 27, 1993).
Weier et al (Hum. Genet. (1991) 87:489-494).
Genbank Accession No. AC100813 (Mar. 2003).
Osoegawa et al (Genomics (1998)52:1-8).
Genbank Accession No. AC022578.
Pieter de Jong email (Jun. 12, 2002).
Genbank Accession No. AC068274 (2005).
Genbank Accession No. AC009631 (2002).
adfda
Hillier, L., et al. (1995) y177g12r1 homosapiens cDNA clone 442645. XP 002109141—EMBL Database Entry HS164152, Accession No. H06164.
Kruglyak, L (1997) The use of a genetic map of biallelic markers in linkage studies. Nature Genetics 17(1): 21-24.
Schork, N.J. et al. (1997) Linkage disequiibrum mapping for quantitative traits within case/control setting. American Journal of Human Genetics 61(4) p. A293.
Wang, D., et al. (1996) Toward a third generation genetic map of the human genome based bi-allelic polumorphisms. American Journal of Human Genetics 59(4) p. A03.
Wu, C., et al. (1997) Deletion mapping defines three discrete areas of allelic imbalance on chromosome arm 8p in oral and oropharyngeal squamous cell carcinomas. Genes, Chromosomes & Cancer 20:347-353.
Auttray, et al., “(IMAGE: molecular integration of the analysis of the human genome and its expression)”, C R Acad Sci II, 318(2) P. 263-2721 (Feb. 1995).
Ashagbley, et al., “Synthesis of Ether-Linked Analogues of Lysophosphatidate and their Effect on the Proliferation of Human Epithelial Cancer Cells”, Anticancer Research, 18(4A) : 181301818 (1996).
Coleman, J., “Characterization of theEscherichia coligene for 1-acyl-sn-glycerol-3-phosphate acyltransferase (plsC)”, Mol. Gen. Genet. 232(2) :295-303 (1992).
Chumakov, et al., “A YAC contig map of the human genome”, NATURE, 377 Supp : 175-297 (1995).
Durieux, et al., “Signalling properties of lysophosphatidic acid”, Trends in Pharmacol. Sci., 14(6) : 249-254 (1993).
Eberhardt., et al., “Human Lysophosphatidic Acid Acyltransferase”, J. Biol. Chem., 272(32) : 20299-20305 (1997).
adad
Faas, et al., “Increased phospholipid fatty acid remodeling in human and rat prostatic adenocarcinoma tissues”, J. Urol (Baltimore), 156(1): 243-248 (1996).
Gronwald, et al., “Comparison of DNA Gains and Losses in Primary Ranal Clear Cell Carcinomaa and Metastatic Sites: Importance of 1q and 3p Copy Number Changes in Metastatic Events”, Cancer Research, 57(3) : 461-487 (1997).
Gu, et al., “Identification, cloning, and expression of a cytosolic megalaryocyte protein-tyrosine-phosphatase with sequence homology to cytoskeletal protein 4.1”, Proc. Natl. Acad. Sci. USA. 88(13)): p. 5867-71 (1991).
Hsuan, et al., “Growth Factor-dependent phosphoinositide Signalling”, Int. J. Biochem. Cell. Biol, 29(3) : 415-435 (1997).
Ichikawa, et al., ***Prostate Suppl., 6 : 31-35 (1996).
Kume, et al., “cDNA Cloning and Expression of Murine 1-Acyl-sn-glycerol-3-phosphate Acyltransferase”, Biochemical and Biophysical Research Communications, 237(3) : 663-666 (1997).
Levine, et al., “Lysophosphatidic acid: a novel growth and survival factor for renal proximal tubular cells”, American Physiological Society, 273(4PT2) : F575-F585 (1997).
Martin, T.F.J., “Phosphoinositides as spatial regulators of membrane traffic”, Curr. Opin Neurobiol., 7(3) : 331-338 (1997.
Matsuyama, et al., “Deletion mapping chromosome 8p in prostate cancer by fluorescense in situ hybridization”, ONCOGENE, 9(10 :3071-3078(1994).
Nagai, et al., “Comprehensive allelotyping of human hepetocellular carcinoma”, Onogene, 14(24) :2927-2933 (1997).
Nagiec et al., “A Suppressor Gene That EnablesSaccharomyces ceravisiaeto Grow without Making Sphingolipids Encodes a Protein That Resembles anEscherichia coliFatty Acyltransferase”, Journal of Biological Chemistry, 268(29) : 22156-22163 (1993).
Qi C, et al., “Lysophosphatidic acid stimulates phospholipase D activity and cell proliferation in PC-3 human prostate cancer cells”, J. Cell. Physiol. 174(2) : 261-272 (1998).
Scholnick, et al., “Chromosome 8 Allelic Loss and the Outcome of Patients With Squamous Cell Carinoma of the Supraglottic Larynx”, Journal of the National Cancer Institute, 88(22) : 1676-1682 (2996).
Sunkara, et al., A novel class of low molecular weight (MW) phospholioirl (PL) signaling inhibitors is selectively cvtotoxi for tumor cells (Meeting abstract) Proc Annu M
Sunwoo, et al., “Evidence of Multiple Tumor Suppressor Genes on Chromosome Arm 8p in Supraglottic Laryngeal Cancer”, Genes, Chromosomes & Cancer, 16 :167-169 (1996)
Toker, et al., “Signalling through the lipid products of phosphoinositid-3-OH kinase”, 387 : 673-676 (1997).
Washburn, et al., “Deletion of loci mapping 8p23-pter in human prostate cancers”, Proceedings of the American Association for Cancer Research, 38(#3456) : 515 (Mar. 1997).
Wilson, et al., “2.2 Mb of contiguous nucleotide sequence from chromosome III of C. elegans”, NATURE 368(8466): p. 32-38 (1994).
Yaremko, et al., Deletion Mapping Reveals Two Regions of Chromosome 8 Allele Loss in Colorectal Carcinomas, Genes, Chromosomes & Cancer, 10 : 1-6 (1994).
SwissProt: P26647, date Nov. 1, 1998.
SwissProt: P33333, date Nov. 1, 1998.
SwissProt: P38226, date Nov. 1, 1997.
Genbank Accession No. Z29518, date Nov. 12, 1994.
Genbank Accession No. AB005623, date Oct. 6, 1997.
Genbank Accession No. U56417, date Jun. 4, 1997.
Genbank Accession No. U89336, date Feb. 15, 1997.
Genbank Accession No. Z49860, date Jan. 6, 1996.
Genbank Accession No. Z49770, date Aug. 11, 1997.
Genbank Accession No. Z72511, date Sep. 21, 1998.
Genbank Accession No. AF003136, date Dec, 31m 1997.
Search Report listing sequence EMEST7, Accession No. AA280082.
Public Database Chart.
Patented Sequences Database Chart
Bender et al., Genbank Locus Musphkgz, Accession No. L08057, Jun. 1997.
Hillier et al., Genbank Locus AA056643, Accession No. AA056643, Aug. 1995.
dadf
dafd
Auffray et al. Genbank Locus HSC2E0111, Accession No. Z44999, Sep. 1995.
Stratagene Catalog, pp. 62-63, 1995.
West et al., “Cloning and expression of two human hysophosphatidic acid acyltransferase cDNA that enhance cytoldne-induced signalling responses in cells”, DNA Cell Biol., 16(6) : 691-701 (Jun. 1997).
Chart listing homologous sequences in the GENBANK database, 1 page.
Chart listing homologous sequences in the EMBL Update, EMBL, TREMBL, PRI, and SwissProt database, 10 pages.

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Prostate cancer gene does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Prostate cancer gene, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Prostate cancer gene will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-3750330

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.