Probabilistic method for determining nucleic acid coding...

Details Probabilistic method for determining nucleic acid coding... Probabilistic method for determining nucleic acid coding...

2004-02-11

2008-10-28

Smith, Carolyn L. (Department: 1631)

Data processing: measuring, calibrating, or testing

Measurement system in a specific environment

Biological or biochemical

C702S020000, C703S002000, C703S011000

Reexamination Certificate

active

07444243

ABSTRACT:
The present invention is in the field of bioinformatics, particularly as it pertains to gene prediction. More specifically, the invention relates to the probabilistic analysis of nucleic acid sequences for the determination of coding features, including determination of state probabilities for each nucleotide in a nucleic acid sequence, determination of coding strand, determination of open reading frame extent, determination of insertion and deletion location, determination of exon location, and determination of protein sequence.

REFERENCES:
patent: 2002/0183934 (2002-12-01), Selifonov et al.
Borodovsky et al., “Genmark: Parallel gene recognition for both DNA strands”, 1993, Computers & Chemistry, vol. 17, Issue 2, pp. 123-133.

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