Preparation of a recombinant protein in a prokaryotic host cell

Chemistry: molecular biology and microbiology – Micro-organism – tissue cell culture or enzyme using process... – Using a micro-organism to make a protein or polypeptide

Reexamination Certificate

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C435S252300, C435S252330, C435S252800, C435S069400, C435S069700

Reexamination Certificate

active

06821755

ABSTRACT:

The instant application claims the benefit of provisional U.S. Appl. No. 60/229,010, filed Aug. 30, 2000, which is herein incorporated by reference and DE 100 37 111.6, filed July 27, 2000 (in the German language), which is herein incorporated by reference.
The present invention relates to advantageous processes for preparing heterologous proteins in prokaryotic host cells by improved codon use and/or expression of tRNAs which code for rarely occurring codons in the said host cell. Numerous bacteria, particularly Gram-positive bacteria, for example, have already been used as host cells for the preparation of heterologous recombinant proteins, e.g. secreted proteins, in an endotoxin-free environment (references 8, 9, 19). The bacterium
Staphylococcus carnosus
(
S. carnosus
), for example, which is used in the food industry for the fermentation of meat and fish, is a suitable bacterium for this purpose. It is free from virulence factors and proteolytic activities in the supernatant and is capable of secreting large amounts of protein (10). Moreover, only small amounts of host cell-coded proteins are secreted, which makes it easier to purify the protein produced. Bacterial enzymes (7, 4, 17), for example, have already been recombinantly produced and expressed in
S. carnosus
. Recombinant
S. carnosus
strains which express antigens such as the Streptococcus protein G on their surface,are particularly promising as live vaccines (5, 12).
One crucial disadvantage of numerous bacterial systems is their use of rare codons, which is very different from the codon preference in human genes. The presence of rare codons in
E. coli
led to delayed and reduced expression of recombinant genes (2, 6). The problem of the present invention is therefore to overcome this disadvantage of the prior art and provide a prokaryotic expression system with improved properties.


REFERENCES:
patent: 5840533 (1998-11-01), Niwa et al.
patent: 6270988 (2001-08-01), Brinkmann et al.
patent: 81306193 (1982-07-01), None
patent: 0 373 365 (1990-06-01), None
patent: WO 98/35029 (1998-08-01), None
patent: WO 00/44926 (2000-08-01), None
Makrides, Strategies for achieving high-level expression of genes inescherichia coli, 1996, Microbiological Reviews, pp. 512-538.*
Hua et al., Enhancement of expression of human granulocyte-macrophage colony stimulating factor by argu gene product inescherichia coli,1994, Biochemistry and Molecular Biology International, vol. 32, pp. 537-543.*
Johansen et al., High-level production of fully active human alpha1-antitrypsin inescherichia coli, 1987, Mol. Biol. Med., vol. 4, pp. 291-305.*
Pikaart et al., Expression and codon usage optimization of the erythroid-specific transcription factor cGaTA-1 in baculoviral and bacterial systems, 1996, Protein Expression and Purification, vol. 8, pp. 469-475.*
Makoff et al., Expression of tetanus toxin fragment inE.coli: high level expression by removing rare codons, 1989, Nucleic Acid Research, vol. 17, pp. 10191-10202.*
Hale et al., Codon optimization of the gene encoding a domain from human type 1 neurofibromin protein results in a threefold improvement in expression level inescherichia coli,1998,Protein Expression and Purification, vol. 12, pp. 185-188.*
Ruhikanta et al., Hyperexpression of rat spermatidal protein TP2 inescherichia coliby codon optimization and engineering the vector-encoded 5′ UTR, 1998, Protein Expression and Purification, vol. 13, pp. 184-190.*
George et al., High-level expression inescherichia coliof biologically active bovine growth hormone, 1985, DNA, vol. 4, pp. 273-281.*
Kane, Effects of rare codon clusters on high-level expression of heterologous proteins inescherichia coli, 1995, Current Opinion in Biotechnology, vol. 6, pp. 494-500.*
Gotz et al., Complete nucleotide sequence of the lipase gene fromstaphylococcus hyicuscloned instaphylococcus carnosus,1985, Nucleic Acid Research, vol. 13, pp. 5895-5906.*
Gotz et al.,Staphyloccus carnosus:a new host organism for gene cloning and protein production, 1990, Journal of Applied Bacteriology Symposium Supplement, pp. 49s-53s.*
Pschorr et al., Production of the immunoglobulin variable domain REIv via a fusion protein synthesized and secreted bystaphyloccus carnosus, 1994, Biol. Chem. Hoppe-Seyler, vol. 375, pp. 271-280.*
Wada et al., Codon usage tabulated from the GenBank genetic sequence data, 1992, Nucleic Acids Research, vol. 20, pp. 2111-2118.*
Ikehara et al., Synthesis of a gene gor human growth hormone and its expression inescherichia coli, 1984, Proc. Natl. Sci. USA, vol. 81, pp. 5956-5960.*
Kanaya, S., et al., “Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification ofBacillus subtilistRNAs: gene expression level and species-specific diversity of codon usage based on multivariate analysis,”Gene 238:143-155, Elsevier Science B.V. (Sep. 1999).
Liljeqvist, S., et al., “Surface display of functional fibronectin-binding domains onStaphylococcus carnosus,” FEBS Lett. 446:299-304, Amsterdam Elsevier Science B.V. (Mar. 1999).
Nakamura, Y., et al., “Codon usage tabulated from international DNA sequence databases: status for the year 2000,”Nucleic Acids Res. 28:292, Oxford University Press (Jan. 2000).
Sturmfels, A., et al., “Secretion of human growth hormone by the food-grade bacteriumStaphylococcus carnosusrequires a propeptide irrespective of the signal peptide used,”Arch. Microbiol. 175:295-300, Springer-Verlag (Apr. 2001).
Williams, D.P., et al., “Design, synthesis and expression of a human interleukin-2 gene incorporating the codon usage bias found in highly expressedEscherichia coligenes,”Nucleic Acids Res. 16:10453-10467, Oxford University Press (1988).
Brinkman, U. et al., “High-level expression of recombinant genes inEscherichia coliis dependent on the availability of the dnaY gene product,”Gene 85:109-114, Elsevier Science Publishers B.V. (Biomedical Division) (1989).
Del Tito, Jr., B.J. et al., “Effects of a Minor Isoleucyl tRNA on Heterologous Protein Translation inEscherichia coli,” J. Bacteriol. 177:7086-7091, American Society for Microbiology (1995).
Makrides, S.C., “Strategies for Achieving High-Level Expression of Genes inEscherichia coli,” Microbiol. Rev. 60:512-538, American Society for Microbiology (1996).
Nikoleit, K. et al., “Comparative biochemical and molecular analysis of theStaphylococcus hyicus, Staphylococcus aureusand a hybrid lipase,”Eur. J. Biochem. 228:732-738, Springer International and the Federation of European Biochemical Societies (1995).
Peschel, A. et al., “Inducible production and cellular location of the epidermin biosynthetic enzyme EpiB using an improved staphylococcal expression system,”FEMS Microbiol. Lett. 137:279-284, Elsevier Science B.V. and the Federation of European Microbiological Societies (1996).
Schenk, P.M. et al., “Improved High-Level Expression System for Eukaryotic Genes inEscherichia coliUsing T7 RNA Polymerase and RareArgtRNAs,”BioTechniques 19:196-200, Eaton Publishing Co. (1995).
Wong, S.-L., “Advances in the use ofBacillus subtilisfor the expression and secretion of heterologous proteins,”Curr. Opin. Biotechnol. 6:517-522, Current Biology (1995).

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