Plant genes encoding Dr1 and DRAP1, a global repressor...

Organic compounds -- part of the class 532-570 series – Organic compounds – Carbohydrates or derivatives

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C435S320100, C435S468000, C800S298000

Reexamination Certificate

active

07985850

ABSTRACT:
This invention relates to an isolated nucleic acid fragment encoding a protein involved in regulation of gene expression. The invention also relates to the construction of a chimeric gene encoding all or a portion of the protein involved in regulation of gene expression, in sense or antisense orientation, wherein expression of the chimeric gene results in production of altered levels of the protein involved in regulation of gene expression in a transformed host cell.

REFERENCES:
patent: 5968793 (1999-10-01), Liu et al.
patent: WO 99/09175 (1999-02-01), None
Baxevanis et al 1998, Nucleic Acids Research 26(1): 372-375.
Maldonado et al 1999, Cell 99: 455-458.
Kim et al 2000, Molecular and Cellular Biology 20(7): 2455-2465.
Ronald C. Conaway et al., Annu. Rev. Biochem., vol. 62:161-190. 1993, General Initiation Factors for RNA Polymerase II.
Leigh Zawel et al, Annu. Rev. Biochem., vol. 64:533-561.1995, Common Themes in Assembly and Function of Eukaryotic Transcription Complexes.
Wendy Hanna-Rose et al, Trends in Genetics, vol. 12(6): 229-234, Active Repression Mechanisms of Eukaryotic Transcription Repressors, 1996.
Yang Shi et al., Cell, vol. 67:377-388, Oct. 18, 1981, Transcriptional Repression by YY1, a Human GL1-Kruppel-Related Protein, and Relief of Repression by Adenovirus E1A Protein.
Robert Benezra et al., Cell, vol. 61:49-59, Apr. 8, 1990, The Protein ID: A Negative Regulator of Helix-Loop-Helix DNA Binding Proteins.
Patrick A. Baeuerle et al, Science, vol. 242:540-545, IkB: A Specific Inhibitor of the NF- kB Transcription Factor, 1988.
Donald E. Ayer et al., Cell, vol. 80:767-776, Mar. 10, 1905. Mad-Max Transcriptional Repression Is Mediated by Ternary Complex Formation with Mammallan Homologs of Yeast Repressor Sin3.
Juan A. Inostroza et al., Cell, vol. 70:477-489, Aug. 7, 1992, Dr1, a TATA-Binding Protein-Associated Phosphoprotein and Inhibitor of Class II Gene Transcription.
Sungjoon Kim et al., PNAS, vol. 94:820-825, Feb. 1997, The Dr1/DRAP1 Heterodimer is a Global Repressor of Transcription In vivo.
Takahashi Kuromori et al., Nucleic Acids Res., vol. 22(24):5296-5301, Cloning of cDNAs fromArabidopsis thallanathat encode putative protein phosphatase 2C and a human Dr1-like protein by transformation of a fission yeast mutant, 1994.
Fred Mermelstein et al., Genes & Dev., vol. 10:1033-1048, 1996, Requirement of a corepressor for Dr1-mediated repression of transcription.
Robert J. White et al, Science, vol. 268:448-450, 1994. Differential Regulation of RNA Polymerases I, II, and III by the TBP-Binding Repressor Dr1.
Tae Kook Kim et al., Journ. of Biol. Chem., vol. 270(18):10976-10981, 1995, TATA-binding Protein Residues Implicated in a Functional Interplay between Negative Cofactor NC2(DR1) and General Factors TFIIA and TFIIB.
Jaesang Kim et al., Journ. of Biol. Chem., vol. 271(31:18405-18412, 1996, A Negative Cofactor Containing Dr1/p19 Modulated Transcription with TFIIA in a Promoter-specific Fashion.
Sungjoon Kim et al, Mol. & Cell, Biol., vol. 20(7):2455-2465, Apr. 2000, Genetic Analysts of the Ydr1-Bur6 Repressor Complex Reveals an Intricate Balance among Transcriptional Regulatory Proteins in Yeast.
Andreas Goppelt et al, EMBO J., vol. 15(12):3105-3116, 1996, A mechanism for repression of class II gene transcription through specific binding of NC2 to TBP-promoter complexes via heterodmeric histone fold domains.
Ellen L Gadbois et al, PNAS, vol. 94:3145-3150, Apr. 1997, Functional antagonism between RNA polymerase II holoenzyme and global negative regulator NC2 in vivo.
Gregory Prelich, Mol. & Cell Biol., vol. 17(4)2057-2065, Apr. 1997,Saccharomyces cerevislaeBUR6 Encodes a DRAP1/NC2alpha Homolog that has both Positive and Negative Roles in Transcription in Vivo.
Kam Yeung et al., Mol. & Cell. Biol., vol. 17(1):36-45, Jan. 1997, Functional Dissection of a Human Dr1-DRAP1 Repressor Complex.
Yong Cang et al., EMBO J., vol. 18(23):6662-6671, 1999, A new regulatory domain on the TATA-binding protein.
Jun Xie et al. EMBO J., vol. 19(4):672-682, 2000, A single point mutation in TFIIA suppresses NC2 requirement in vivo.
National Center for Biotechnology Information General Identifier No. 11279032, Jul. 28, 2000, Bevan, M. et al.
National Center for Biotechnology Information General Identifier No. 8346558, Jun. 8, 2000, Bevan, M. et al.
National Center for Biotechnology Information General Identifier No. 1352316, Feb. 1, 1996, Kuromori, T. et al., Cloning of cDNAs fromArabidopsis thailanathat encode putative protein phosphatase 2C and a human Dr1-like protein by transformation of a fission yeast mutant.
Andreas D. Baxevanis et al, Nucleic Acids Res., vol. 26(1):372-375, 1998, Histone Sequence Database: new histone fold family members.
National Center for Biotechnology Information General Identifier No. 7513394, Nov. 5, 1999, Goppelt, A. et al., A mechanism for repression of class II gene transcription through specifc binding of NC2 to TBP-promoter complexes via heterodlmeric histone fold domains.
National Center for Biotechnology Information General Identifier No. 1491710, Mar. 3, 1999, Goppelt, A. et al., A mechanism for repression of class II gene transcription through specific binding of NC2 to TBP-promoter complexes via heterodlmeric histone fold domains.
Cheng-Ting Chien et al., PNAS, vol. 88:9578-9582, Nov. 1991, The two-hybrid system: A method to Identify and clone genes for proteins that Interact with a protein of interest.
Randolph Eible, Biotechniques, vol. 13:18-20, 1992. A simple and Efficient Procedure for Transformation of Yeasts.
George C. Allen et al., The Plant Cell, vol. 5:603-613, Jun. 1993, Scaffold Attachment Regions Increase Reporter Gene Expression in Stably Transformed Plant Cells.
Zhan-Bin Liu et al., Plant Cell, vol. 6:645-657, May 1994, Soybean GH3 Promoter Contains Multiple Auxin-Inducible Elements.
A. G. Von Arnim et al., Gene, vol. 221:35-43, 1998, Cloning vectors for the expression of green fluorescent protein fusion proteins in transgenic plants.
Frank Gindullis et al, Plant Cell, vol. 11:1765-1767, Sep. 1999. MAF1, a Novel Plant Protein Interacting with Matrix Attachment Region Binding Protein MFP1, is located at the Nuclear Envelope.
Dirk Gorlich et al. Science, vol. 271:1513-1518, Mar. 1996, Nucleocytoplasmic Transport.
Robert J. Grebenok et al. Plant J., vol. 12(3):685-696, 1997, Characterization of the targeted nuclear accumulation of GFP within the cells of transgernic plants.
Qun Zhu et al., Plant Mol. Biol., vol. 29:535-550, 1995, Cloning and properties of a rice gene encoding phenylalanine ammonia-hyase.
Nobuko Iwataki et al, Plant Mol. Biol., vol. 34:69-79, 1997, Restoration of TATA-dependent transcription in a heat-inactivated extract of tobaaco nuclei by recombinant TATA-binding protein (TBP) from tobacco.
Qun Zhu et al., Plant J., vol. 7(6):1021.1030,1995. Accurate In vitro transcription from circularized plasmid templates by plant whole cell extracts.
F. Sanger et al. PNAS, vol. 74(12):5463-5467, Dec. 1977, DNA sequencing with chain-terminating Inhibitors.
Qun Zhu et al. Plant Cell, vol. 7:1681-1689, Oct. 1995, TATA Box and Initiator Functions in the Accurate Transcription of a Plant Minimal Promoter in Vitro.
Richard A. Jefferson, Plant Mol. Biol. Rep., vol. 5(4):387-405, 1987, Assaying Chimeric Genes in Plants: The GUS Gene Fusion System.
Song, Wen et al., “Functional Dissection of a Rice Dr1/DrAp1 Transcriptional Repression Complex”, The Plant Cell (Jan. 2002) vol. 14, pp. 181-195.
Baxevanis, Andreas D. et al, “Histone Sequence Database:new histone fold family members”, Nucleic Acids Research (1998) vol. 26, No. 1, pp. 372-375.

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Plant genes encoding Dr1 and DRAP1, a global repressor... does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Plant genes encoding Dr1 and DRAP1, a global repressor..., we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Plant genes encoding Dr1 and DRAP1, a global repressor... will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-2661299

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.