Nucleic acid clamps

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid

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435 691, 435 911, 435183, 536 231, 536 2431, 536 2432, C12Q 168, C12P 2100, C12N 900, C07H 2104

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06004750&

ABSTRACT:
The invention relates to nucleic acid clamps and methods for using nucleic acid clamps, for example, to inhibit gene expression or cleavage, or to specifically cleave a target nucleic acid. Nucleic acid clamps are molecular devices which can bind nucleic acids with affinity and specificity and have a recognition sequence as small as seven bases. Nucleic acid clamps can be used to modify the effective recognition sequence of restriction endonucleases, reducing the frequency and enhancing the length of the recognition sequence, but without diminishing specificity. The invention also relates to methods for the use of nucleic acid clamps for the treatment of disorders involving abnormal gene expression.

REFERENCES:
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Demidov et. al.. Kinetics and mechanism of polyamide ("peptide") nucleic acid binding to duplex DNA. PNAS (USA). vol. 92:2637-2641, Mar. 1995.
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Nielsen, et al., "Peptide Nucleic Acid (PNA). A DNA Mimic with a Peptide Backbone", (1994) Bioconjugate Chemistry, vol. 5, No. 1, pp. 3-7.
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Cherny, et al., "DNA unwinding upon strand-displacement binding of a thymine-substituted DNA" (1993), Proc. Natl. Acad. Sci. USA, vol. 90, pp. 1667-1670.
Demidov, et al., "Stability of peptide nucleic acids in human serum and cellular extracts", (1994), Biochemical Pharmacology, vol. 48, No. 6, pp. 1310-1313.
Giovannangeli,et al., "Oligonucleotide clamps arrest DNA synthesis on a single-stranded DNA target", (1993), Proc. Natl, Acad. Sci., USA, vol. 90, pp. 10013-10017.

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