Chemistry: molecular biology and microbiology – Micro-organism – tissue cell culture or enzyme using process... – Preparing compound containing saccharide radical
Reexamination Certificate
2005-03-08
2005-03-08
Myers, Carla J. (Department: 1634)
Chemistry: molecular biology and microbiology
Micro-organism, tissue cell culture or enzyme using process...
Preparing compound containing saccharide radical
C435S006120, C536S025300
Reexamination Certificate
active
06864071
ABSTRACT:
This invention relates to devices, methods, and compositions of matter for the multiplex amplification and analysis of nucleic acid sequences in a sample using ligation-dependent strand displacement amplification technologies in combination with bioelectronic microchip technology.
REFERENCES:
patent: 4543225 (1985-09-01), Beaujean
patent: 4683195 (1987-07-01), Mullis et al.
patent: 4683202 (1987-07-01), Mullis et al.
patent: 4800159 (1989-01-01), Mullis et al.
patent: 4988617 (1991-01-01), Landegren et al.
patent: 5130238 (1992-07-01), Malek et al.
patent: 5171392 (1992-12-01), Iida et al.
patent: 5202231 (1993-04-01), Drmanac et al.
patent: 5259926 (1993-11-01), Kuwabara et al.
patent: 5270184 (1993-12-01), Walker et al.
patent: 5380489 (1995-01-01), Sutton et al.
patent: 5422252 (1995-06-01), Walker et al.
patent: 5425848 (1995-06-01), Haisma et al.
patent: 5455166 (1995-10-01), Walker
patent: 5470723 (1995-11-01), Walker et al.
patent: 5474895 (1995-12-01), Ishii et al.
patent: 5514540 (1996-05-01), Teoule et al.
patent: 5516663 (1996-05-01), Backman et al.
patent: 5545531 (1996-08-01), Rava et al.
patent: 5573907 (1996-11-01), Carrino et al.
patent: 5593867 (1997-01-01), Walker et al.
patent: 5594111 (1997-01-01), Stolowitz
patent: 5594151 (1997-01-01), Stolowitz
patent: 5605662 (1997-02-01), Heller et al.
patent: 5623055 (1997-04-01), Stolowitz
patent: 5624825 (1997-04-01), Walker et al.
patent: 5627054 (1997-05-01), Gillespie
patent: 5632957 (1997-05-01), Heller et al.
patent: 5641658 (1997-06-01), Adams et al.
patent: 5648211 (1997-07-01), Fraiser et al.
patent: 5648470 (1997-07-01), Stolowitz
patent: 5668257 (1997-09-01), Stolowitz
patent: 5668258 (1997-09-01), Stolowitz
patent: 5677431 (1997-10-01), Stolowitz
patent: 5747259 (1998-05-01), You
patent: 5830711 (1998-11-01), Barany et al.
patent: 5849486 (1998-12-01), Heller et al.
patent: 5876924 (1999-03-01), Zhang et al.
patent: 5994063 (1999-11-01), Metzker et al.
patent: 6017696 (2000-01-01), Heller
patent: 6017738 (2000-01-01), Morris et al.
patent: 6048690 (2000-04-01), Heller et al.
patent: 6051380 (2000-04-01), Sosnowski et al.
patent: 6066461 (2000-05-01), McMillian et al.
patent: 6124120 (2000-09-01), Lizardi
patent: 6238868 (2001-05-01), Carrion et al.
patent: 6251660 (2001-06-01), Muir et al.
patent: 6274320 (2001-08-01), Rothberg et al.
patent: 6309833 (2001-10-01), Edman et al.
patent: 0 320 308 (1989-06-01), None
patent: 0156372 (1989-11-01), None
patent: 3-0545 (1991-03-01), None
patent: 03054569 (1991-03-01), None
patent: 9535390 (1995-12-01), None
patent: 9601836 (1996-01-01), None
patent: 9615271 (1996-05-01), None
patent: WO 9630546 (1996-10-01), None
Stratagene, Restriction Enzyem Quick-Reference List, 1995, p. 235.*
Walker, Terrance W., Isothermal in vitro amplification of DNA by a restriction . . . , Proc.Natl. Acad. Sci USA, vol. 89, pp 392-396, Jan. 1992.*
Bertina et al., “Mutation in blood coagulation factor V associated with resistance to activated protein C,”Nature369:64-67 (1994).
Chee et al., “Accessing Genetic Information with High-Density DNA Arrays,”Science274:610-614 (1996).
DeRisi et al., “Exploring the Metabolic and Genetic Control of Gene Expression on a Genomic Scale,”Science278:680-686 (1997).
DeRisi et al., “Use of a cDNA microarray to analyse gene expression patterns in human cancer,”Nature genetics14(4):457-460 (1996).
Edman et al., “Electric field directed nucleic acid hybridization on microchips,”Nucleic Acids Research25(24):4907-4914 (1997).
Guo et al., “Enhanced discrimination of single nucleotide polymorphisms by artificial mismatch hybridization,”Nature Biotechnology15(4):331-335 (1997).
Heller et al., Discovery and analysis of inflammatory disease-related genes using cDNA microarrays,Proc. Natl. Acad. Sci, USA94:2150-2155 (1997).
Hughes et al., “Determination of the Etiology of presumptive Feline Leprosy by 16S rRNA Gene Analysis,”Journal of Clinical Microbiology35(10):2464-2471 (1997).
Linton et al., “PCR Detection, Identification to Species level, and Fingerprinting ofCampylobacter jejuniandCampylobacter coliDirect from Diarrheic Samples,”Journal of Clinical Microbiology35(10):2568-2572 (1997).
Liu et al., “Molecular Detection of a Common Mutation in Coagulation Factor V Causing Thrombosis via Herediatry Resistance to Activated Protein C,”Diagnostic Molecular Pathology4(3):191-197 (1995).
Malek et al., “Nucleic Acid Sequence-Based Amplification (NASBA™)”, Protocols for Nucleic Acid Analysis By Nonradioactive Probes,Methods in Molecular Biology28:253-260 (1994).
Milla et al., Use of the Restriction Enzyme Aval and Exo- Bst Polymerase in Strand Displacement Amplification,BioTechniques24(3):392-395 (1998).
Robinson et al., “Molecular Recognition Mediated by Bound Water; A Mechanism for Star Activity of the Restriction Endonuclease EcoRI,”J. Mol. Biol.234:302-306 (1993).
Robinson et al., “Hydrostatic Pressure Reverses Osmotic Pressure Effects on the Specificity of EcoRI-DNA interactions,”Biochemistry33(13):3787-3793 (1994).
Robinson et al., “Heterogeneity in molecular recognition by restriction endonucleases: Osmotic and hydrostatic pressure effects on BamHI, Pvu II, and EcoRV specificity,”Proc. Natl. Acad. Sci. USA92:3444-3448 (1995).
Schena et al., “Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray,”Science270:467-470 (1995).
Schena et al., “Parallel human genome analysis: Microarray-based expression monitoring of 1000 genes,”Proc. Natl. Acad. Sci USA93:10614-10619 (1996).
Sosnowski et al., “Rapid determination of single base mismatch mutations in DNA hybrids by direct electric field control,”Proc. Nat. Acad. Sci. USA94:1119-1123 (1997).
Southern et al., “Analyzing and Comparing Nucleic Acid Sequences by Hybridization to Arrays to Oligonucleotides: Evaluation Using Experimental Models,”Genomics13:1008-1017 (1992).
Southern et al., “Detection of Specific Sequences Among Dna Fragments Separated by Gel Electrophroesis,”J. Mol. Biol.98:503-517 (1975).
Southern et al., “DNA chips: analysing sequence by hybridization to oligonucleotides on a large scale,”TIG12(3):110-115 (1996).
Spargo et al., “Detection ofM. tuberculosisDNA using Thermophilic Strand Displacement Amplification,”Molecular and Cellular Probes10:247-256 (1996).
Walker, “Empirical Aspects of Strand Displacement Amplification,”PCR Methods and Applications3(1):1-6 (1993).
Woese, “Bacterial Evolution,”Microbiological Reviews51(2):221-271 (1987).
Wolf, H. et al., New Developments in Nucleic Acid Hybridization, pp 373-391, 1984.
Guo, et al., Direct Fluorescence Analysis Of Genetic Polymorphisms By Hybridization With Oligonucleotide Arrays On Glass Supports, Nucleic Acids Research, 22, 24, 1994, 5456-5464.
Gyllensten, et al., Generation of Single Stranded DNA By The Polymerase Chain Reaction & Its Application To Direct Sequencing Of The HLA-DQA Locus, Proc. Natl. Acad. Sci. USA, 85, Oct. 20, 1988, 7652-7656.
Carrino John J.
Diver Jonathan M.
Gerrue Louis O.
Myers Carla J.
Nanogen/Becton Dickinson Partnership
O'Melveny & Myers LLP
Sheinberg Monika
LandOfFree
Multiplex amplification and separation of nucleic acid... does not yet have a rating. At this time, there are no reviews or comments for this patent.
If you have personal experience with Multiplex amplification and separation of nucleic acid..., we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Multiplex amplification and separation of nucleic acid... will most certainly appreciate the feedback.
Profile ID: LFUS-PAI-O-3437773