Modified PE40 toxin fusion proteins

Chemistry: natural resins or derivatives; peptides or proteins; – Proteins – i.e. – more than 100 amino acid residues

Reexamination Certificate

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C424S183100, C435S069100, C435S069400, C435S069500, C435S070100, C514S012200, C530S351000

Reexamination Certificate

active

06207798

ABSTRACT:

BACKGROUND OF THE INVENTION
Traditional cancer chemotherapy relies on the ability of drugs to kill tumor cells in cancer patients. Unfortunately, these same drugs frequently kill normal cells as well as the tumor cells. The extent to which a cancer drug kills tumor cells rather than normal cells is an indication of the compound's degree of selectivity for tumor cells. One method of increasing the tumor cell selectivity of cancer drugs is to deliver drugs preferentially to the tumor cells while avoiding normal cell populations. Another term for the selective delivery of chemotherapeutic agents to specific cell populations is “targeting”. Drug targeting to tumor cells can be accomplished in several ways. One method relies on the presence of specific receptor molecules found on the surface of tumor cells. Other molecules, referred to as “targeting agents”, can recognize and bind to these cell surface receptors. These “targeting agents” include, e.g., antibodies, growth factors, or hormones. “Targeting agents” which recognize and bind to specific cell surface receptors are said to target the cells which possess those receptors. For example, many tumor cells possess a protein on their surfaces called the epidermal growth factor receptor. Several growth factors including epidermal growth factor (EGF) and transforming growth factor-alpha (TGF-alpha) recognize and bind ~to the EGF receptor on tumor cells. EGF and TGF-alpha are therefore “targeting agents” for these tumor cells.
“Targeting agents” by themselves do not kill tumor cells. Other molecules including cellular poisons or toxins can be linked to “targeting agents”to create hybrid molecules that possess both tumor cell targeting and cellular toxin domains. These hybrid molecules function as tumor cell selective poisons by virtue of their abilities to target tumor cells and then kill those cells via their toxin component. Some of the most potent cellular poisons used in constructing these hybrid molecules are bacterial toxins that inhibit protein synthesis in mammalian cells. Pseudomonas exotoxin A is one of these bacterial toxins, and has been used to construct hybrid “targeting-toxin” molecules (U.S. Pat. No. 4,545,985).
Pseudomonas exotoxin A intoxicates mammalian cells by first binding to the cell's surface, then entering the cell cytoplasm and inactivating elongation factor 2 which is a cellular protein required for protein synthesis. Pseudomonas exotoxin A has been used to construct anticancer hybrid molecules using monoclonal antibodies and protein hormones. However, one problem with these hybrid molecules is that they exhibit toxicity towards normal cells. At least part of the toxicity associated with hybrid molecules containing pseudomonas exotoxin A is due to the ability of pseudomonas exotoxin A by itself to bind to and enter many types of mammalian cells. Therefore, hybrid molecules formed between pseudomonas exotoxin A and specific “targeting agents” can bind to many normal cells in addition to the cells recognized by the “targeting agent”. One method of dealing with this problem is to modify pseudomonas exotoxin A so that it is no longer capable of binding to normal cells. This can be accomplished by removing that portion of the pseudomonas exotoxin A molecule which is responsible for its cellular binding activity. A truncated form of the pseudomonas exotoxin A molecule has been prepared which retains the ability to inactivate elongation factor 2 but no longer is capable of binding to mammalian cells. This modified pseudomonas exotoxin A molecule is called pseudomonas exotoxin-40 or PE
40
(Hwang et al., Cell 48: 129-136 1987).
PE
40
has been linked to several targeting molecules including TGF-alpha (Chaudhary et al., PNAS USA 84: 4583-4542 1987). In the case of TGF-alpha, hybrid molecules containing PE
40
and TGF-alpha domains are capable of specifically binding to tumor cells that possess EGF receptors and intoxicating these cells via inhibiting protein synthesis. In order for this hybrid molecule to efficiently bind to the EGF receptor it must assume the proper conformation. Efficient receptor binding is also dependent on having the “targeting domain” properly exposed so that it is accessible for binding. When TGF-alpha and PE
40
hybrid molecules are produced as fusion proteins in bacteria using recombinant DNA techniques the majority of hybrid molecules exhibit poor EGF receptor binding activity.
DISCLOSURE STATEMENT
1. U.S. Pat. No. 4,545,985 teaches that pseudomonas exotoxin A can be conjugated to antibodies or to epidermal growth factor. U.S. Pat. No. 4,545,985 further teaches that these conjugates can be used to kill human tumor cells.
2. U.S. Pat. No. 4,664,911 teaches that antibodies can be conjugated to the A chain or the B chain of ricin which is a toxin obtained from plants. U.S. Pat. No. 4,664,911 further teaches that these conjugates can be used to kill human tumor cells.
3. U.S. Pat. No. 4,675,382 teaches that hormones such as melanocyte stimulating hormone (MSH) can be linked to a portion of the diphtheria toxin protein via peptide bonds. U.S. Pat. No. 4,675,382 further teaches that the genes which encode these proteins can be joined together to direct the synthesis of a hybrid fusion protein using recombinant DNA techniques. This fusion protein has the ability to bind to cells that possess MSH receptors.
4. Murphy et al., PNAS USA 83: 8258-8262 1986, Genetic construction, expression, and melanoma-selective cytotoxicity of a diphtheria toxin-related alpha-melanocyte-stimulating hormone fusion protein. This article teaches that a hybrid fusion protein produced in bacteria using recombinant DNA technology and consisting of a portion of the diphtheria toxin protein joined to alpha-melanocyte-stimulating hormone will bind to and kill human melanoma cells.
5. Kelley et al., PNAS USA 8 5: 3980-3984 1988, Interleukin 2-diphtheria toxin fusion protein can abolish cell-mediated immunity in vivo. This article teaches that a hybrid fusion protein produced in bacteria using recombinant DNA technology and consisting of a portion of the diphtheria toxin protein joined to interleukin 2 functions in nude mice to suppress cell mediated immunity.
6. Allured et al., PNAS USA 83: 1320-1324 1986, Structure of exotoxin A of
Pseudomonas aeruginosa
at 3.0 Angstrom. This article teaches the three dimensional structure of the pseudomonas exotoxin A protein.
7. Hwang et al., Cell 48: 129-136 1987, Functional Domains of Pseudomonas Exotoxin Identified by Deletion Analysis of the Gene Expressed in
E. Coli.
This article teaches that the pseudomonas exotoxin A protein can be divided into three distinct functional domains responsible for: binding to mammalian cells, translocating the toxin protein across lysosomal membranes, and ADP ribosylating elongation factor 2 inside mammalian cells. This article further teaches that these functional domains correspond to distinct regions of the pseudomonas exotoxin A protein.
8. European patent application 0 261 671 published Mar. 30, 1988 teaches that a portion of the pseudomonas exotoxin A protein can be produced which lacks the cellular binding function of the whole pseudomonas exotoxin A protein but possess the translocating and ADP ribosylating functions of the whole pseudomonas exotoxin A protein. The portion of the pseudomonas exotoxin A protein that retains the translocating and ADP ribosylating functions of the whole pseudomonas exotoxin A protein is called pseudomonas exotoxin-40 or PE-40. PE-40 consists of amino acid residues 252-613 of the whole pseudomonas exotoxin A protein as defined in Gray et al., PNAS USA 81: 2645-2649 1984. This patent application further teaches that PE-40 can be linked to transforming growth factor-alpha to form a hybrid fusion protein produced in bacteria using recombinant DNA techniques.
9. Chaudhary et al., PNAS USA 84: 4538-4542 1987, Activity of a recombinant fusion protein between transforming growth factor type alpha and Pseudomonas toxin. This article teaches that hybrid fusion proteins formed between PE-40 and transforming gro

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