Methods for protein interaction determination

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving antigen-antibody binding – specific binding protein...

Reexamination Certificate

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C435S006120, C435S320100, C536S023100

Reexamination Certificate

active

10842741

ABSTRACT:
The present invention provides a method for identifying a plurality of pairs of interacting proteins and plasmids for use in the method. The pair of plasmids is adapted for use in a modified two hybrid system wherein wherein each plasmid comprises a recombinase recognition site. The method comprises the steps of providing cDNAs encoding test polypeptides, inserting the cDNAs into the first and second plasmids, recombining the first and second plasmids to obtain recombined plasmids, isolating and digesting the recombined plasmids, ligating the restriction fragments to a universal adapter to provide a pool of digested fragments flanked by a universal adapter, selecting and amplifying desired sequences, forming concatamers from the amplified sequences, and sequencing the concatamers to determine the nucleotide sequences encoding a plurality of pairs of interacting proteins.

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patent: 2003/0143578 (2003-07-01), Pruitt et al.
Fields et al. A novel genetic system to detect protein-protein interactions. Nature 340: 245-246, 1989.
White, M. The yeast two-hybrid system: Forward and reverse. PNAS 93: 10001-10002, 1996.
Zhang et al.,Cre recombinase-mediated inversion using lox66 and lox71: method to introduce conditional point mutations into the CREB-binding protein, Nucleic Acids Research, 2002, vol. 30, No. 17, e90, pp. 1-5.
Vidal, M et al., Yeast forward and reverse ‘n’-hybrid systems. Nucleic Acids Research, Feb. 1999, vol. 27, No. 4, pp. 919-929.

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