Drug – bio-affecting and body treating compositions – Radionuclide or intended radionuclide containing; adjuvant... – Coated – impregnated – or colloidal particulate
Reexamination Certificate
2011-08-23
2011-08-23
Weber, Jon P (Department: 1657)
Drug, bio-affecting and body treating compositions
Radionuclide or intended radionuclide containing; adjuvant...
Coated, impregnated, or colloidal particulate
Reexamination Certificate
active
08003076
ABSTRACT:
The present invention provides methods and apparatus for purifying metabolites of interest and conducting metabolic analyses. The methods generally involve determining metabolic flux values for a plurality of target analytes by monitoring the relative isotope abundance of a stable isotope in a substrate labeled with the stable isotope and/or one or more target metabolites formed through metabolism of the labeled substrate. Certain methods utilize multiple electrophoretic methods to separate the target analytes from other components within the sample being analyzed. The methods can be used in a variety of applications including screens to identify metabolites that are correlated with certain diseases and diagnostic screens for identifying individuals having, or susceptible to, a disease.
REFERENCES:
patent: 4568074 (1986-02-01), Murayoshi
patent: 6277984 (1986-02-01), Murayoshi
patent: 4647445 (1987-03-01), Lees
patent: 4656133 (1987-04-01), Goux
patent: 4690749 (1987-09-01), Van Alstine et al.
patent: 4725343 (1988-02-01), Hjerten et al.
patent: 4830010 (1989-05-01), Marshall
patent: 4842701 (1989-06-01), Smith et al.
patent: 4859301 (1989-08-01), Brenner et al.
patent: 4911808 (1990-03-01), Hjerten
patent: 4931328 (1990-06-01), Swedberg
patent: 4994165 (1991-02-01), Lee et al.
patent: 4997536 (1991-03-01), Ohms et al.
patent: 5015350 (1991-05-01), Wiktorowicz
patent: 5059702 (1991-10-01), Dooley et al.
patent: 5074982 (1991-12-01), Novotny et al.
patent: 5096554 (1992-03-01), Chin
patent: 5110424 (1992-05-01), Chin
patent: 5110434 (1992-05-01), Zhu et al.
patent: 5132432 (1992-07-01), Haugland et al.
patent: 5143753 (1992-09-01), Novotny et al.
patent: 5151164 (1992-09-01), Blanchard et al.
patent: 5180475 (1993-01-01), Young et al.
patent: 5181999 (1993-01-01), Wiktorowicz
patent: 5210412 (1993-05-01), Levis et al.
patent: 5240585 (1993-08-01), Young et al.
patent: 5262031 (1993-11-01), Lux et al.
patent: 5282942 (1994-02-01), Herrick
patent: 5290587 (1994-03-01), Young et al.
patent: 5306412 (1994-04-01), Whitehouse et al.
patent: 5314593 (1994-05-01), Swedberg
patent: 5317156 (1994-05-01), Cooper et al.
patent: 5320727 (1994-06-01), Jackson
patent: 5320730 (1994-06-01), Ewing et al.
patent: 5322608 (1994-06-01), Karger et al.
patent: 5338686 (1994-08-01), Hellerstein
patent: 5358618 (1994-10-01), Ewing et al.
patent: 5378334 (1995-01-01), Dadoo et al.
patent: 5386832 (1995-02-01), Wagner et al.
patent: 5391274 (1995-02-01), Shieh
patent: 5413917 (1995-05-01), Malloy et al.
patent: 5414259 (1995-05-01), Kingston
patent: 5415747 (1995-05-01), Holloway et al.
patent: 5429728 (1995-07-01), Gordon
patent: 5439803 (1995-08-01), Ross et al.
patent: 5441613 (1995-08-01), McCormick
patent: 5447617 (1995-09-01), Shieh
patent: 5462646 (1995-10-01), Shieh
patent: 5470753 (1995-11-01), Sepetov et al.
patent: 5505832 (1996-04-01), Laukien et al.
patent: 5516636 (1996-05-01), McCapra
patent: 5538897 (1996-07-01), Yates, III et al.
patent: 5542419 (1996-08-01), Moulton-Barrett et al.
patent: 5552541 (1996-09-01), Adams
patent: 5599432 (1997-02-01), Manz et al.
patent: 5611903 (1997-03-01), Janssens et al.
patent: 5705662 (1998-01-01), McCapra
patent: 5784154 (1998-07-01), Pawliszyn
patent: 5792331 (1998-08-01), Srinivasan et al.
patent: 5827659 (1998-10-01), Patterson
patent: 5837116 (1998-11-01), Harrington et al.
patent: 5837219 (1998-11-01), Watanabe et al.
patent: 5840388 (1998-11-01), Karger et al.
patent: 5856082 (1999-01-01), Aebersold et al.
patent: 5872010 (1999-02-01), Karger et al.
patent: 5910403 (1999-06-01), Hellerstein
patent: 5916537 (1999-06-01), Kajiwara et al.
patent: 5919709 (1999-07-01), Parmelee et al.
patent: 5924995 (1999-07-01), Klein et al.
patent: 5985121 (1999-11-01), Wu et al.
patent: 5993627 (1999-11-01), Anderson et al.
patent: 6004770 (1999-12-01), Nelson
patent: 6010846 (2000-01-01), Hellerstein
patent: 6013165 (2000-01-01), Wiktorowicz et al.
patent: 6017693 (2000-01-01), Yates, III et al.
patent: 6027890 (2000-02-01), Ness et al.
patent: 6074542 (2000-06-01), Dolnik et al.
patent: 6103199 (2000-08-01), Bjornson et al.
patent: 6207464 (2001-03-01), Karandikar
patent: 6277644 (2001-08-01), Farnsworth et al.
patent: 6297099 (2001-10-01), Hsieh et al.
patent: 6329146 (2001-12-01), Crooke et al.
patent: 6335525 (2002-01-01), Takada et al.
patent: 6355416 (2002-03-01), Abramson
patent: 6372353 (2002-04-01), Karger et al.
patent: 6375818 (2002-04-01), Huang et al.
patent: 6379971 (2002-04-01), Schneider et al.
patent: 6537432 (2003-03-01), Schneider et al.
patent: 6677114 (2004-01-01), Schneider et al.
patent: 6764817 (2004-07-01), Schneider
patent: 6818112 (2004-11-01), Schneider et al.
patent: 6849396 (2005-02-01), Schneider
patent: 2003/0199751 (2003-10-01), Gonzalez et al.
patent: 2004/0091943 (2004-05-01), Schneider
patent: WO95/33989 (1995-12-01), None
patent: WO96/34406 (1996-10-01), None
patent: WO98/51820 (1998-11-01), None
patent: WO99/32501 (1999-07-01), None
patent: WO00/11208 (2000-03-01), None
patent: WO02/61661 (2002-08-01), None
Gopher et al. “Determination of fructose metabolic pathways in normal and fructose-intolerant childres: a 13C NMR study using [U-13C]fructose”, PNAS, 1990, 87:5449-5453.
Aebersold et al., “Design, Synthesis, and Characterization of a Protein Sequencing Reagent Yielding Amino Acid Derivatives with Enhanced Detectability by Mass Spectrometry,”Protein Science1992 vol. 1 pp. 494-503.
Bai, Jian et al. “Peptide Mapping by CNBr Degradation on a Nitrocellulose Membrane with Analysis by Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry”,Analytical Chemistry, May 15, 1995, vol. 67, No. 10, pp. 1705-1710.
U.S. Appl. No. 60/415,481, filed Oct. 1, 2002, Soren Ebdrup.
Goodlett, D.R. et al. “The Use of Mass Spectrometry in Proteomics”;International Business Communications, Pre-conference Symposium Slides, Wednesday, Dec. 1, 1999, pp. 1-11.
Gygi, Steven P. et al. “Quantitative Analysis of Complex Protein Mixtures Using Isotope-coded Affinity Tags”,Nature Biotechnology, Oct. 1999, vol. 17, pp. 994-999.
Gygi, Steven P. “Functional Proteomics—Advances in the Development of Drug Leads and Diagnostic Applications Using Integrated Protein-Based Technologies—Slides”,International Business Communications, 4th International Conference Slides, Dec. 1-3, 1999, pp. 1-11.
Hachey, David et al. “Isotope Ratio Measurements in Nutrition And Biomedical-research.” Mass Spectrometry Reviews, 1987, pp. 289-328, vol. 6.
Håkansson, Kristina, et al; Electron Capture Dissociation and Infrared Multiphoton Dissociation MS/MS of an N-Glycosylated Tryptic Peptide to Yield Complementary Sequence Information;Analytical Chemistry; Sep. 15, 2001; pp. 4530-4536; vol. 73, No. 18.
Henry, Kent D., et al.; Electrospray Ionization with Fourier-Transform Mass Spectrometry. Charge State Assignment from Resolved Isotopic Peaks;Organic Mass Spectrometry, 1990; pp. 490-492; vol. 25.
Henzel, W.J. et al. “Identifying Proteins from Two-dimensional Gels by Molecular Mass Searching of Peptide Fragments in Protein Sequence Databases”,Proc. Natl. Acad. Sci. USA, Jun. 1993, vol. 90, pp. 5011-5015.
Hochstrasser, et al. “Methods for Increasing the Resolution of Two-Dimensional Protein Electrophoresis,”Anal. Biochem., 173:424-435 (1988).
Huang, Z-H. et al.; “Protein Sequencing by Matrix-Assisted Laser Desorption Ionization-Postsource Decay-Mass Spectrometry Analysis of the N-Tris(2,4,6-trimethoxyphenyl)phosphine-Acetylated Tryptic Digests”,Analytical Biochemistry(1999), vol. 268, pp. 305-317.
Huhmer et al., “Separation and Analysis of Peptides and Proteins,”Analytical Chemistry1997 vol. 69 pp. 29R-57R.
Jensen, Ole et al. “Sequence Patterns Produced by Incomplete Ezymatic Digestion or One-step Edman Degradation of Peptide Mixture as Probes for Protein Database Searches”Electrophoresis(1996) vol. 15(5); pp. 938-944.
Jensen, P.K. et al.; “Probing Proteomes Using Capillary Isoelectric Focusi
Kilpatrick Townsend & Stockton LLP
Shen Bin
Target Discovery, Inc.
Weber Jon P
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