Methods and compositions for interaction trap assays

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

Reexamination Certificate

active

10915233

ABSTRACT:
The present invention provides methods and compositions for interaction trap assays for detecting protein-protein, protein-DNA, or protein-RNA interactions. The methods and compositions of the invention may also be used to identify agents which may agonize or antagonize a protein-protein, protein-DNA, or protein-RNA interactions. In certain embodiments, the interaction trap system of the invention is useful for screening libraries with greater than 107members. In other embodiments, the interaction trap system of the invention is used in conjunction with flow cytometry. The invention further provides a means for simultaneously screening a target protein or nucleic acid sequence for the ability to interact with two or more test proteins or nucleic acids.

REFERENCES:
patent: 5580736 (1996-12-01), Brent et al.
patent: 5837500 (1998-11-01), Ladner et al.
patent: 5925523 (1999-07-01), Dove et al.
patent: 2002/0061512 (2002-05-01), Kim et al.
patent: WO 96/32503 (1996-10-01), None
patent: WO 98/07845 (1998-02-01), None
patent: WO 98/25947 (1998-06-01), None
Allen et al., “Finding Prospective Partners in the Library: The Two-Hybrid System and Phage Display Find a Match,”Trends Biol. Sci 20:511-516 (1995).
Brent et al., “A Eukaryotic Transcriptional Activator Bearing the DNA Specificity of a Prokaryotic Repressor,”Cell 43:729-736 (1985).
Chien et al., “The Two-Hybrid System: A Method to Identify and Clone Genes for Proteins that Interact with a Protein of Interest,”PNAS 88:9578-9582 (1991).
Durfee et al., “The Retinoblastoma Protein Associates With the Protein Phosphatase Type 1 Catalytic Subunit,”Genes&Development 7:555-569 (1993).
Grossel et al., “A Yeast Two-Hybrid System for Discerning Differential Interactions Using Multiple Baits,”Nature Biotechnology 17:1232-1233 (1999).
Gyuris et al., “Cdil, a Human G1 and S Phase Protein Phosphatase That Associates with Cdk2,”Cell 75:791-803 (1993).
Huang et al., “A Permutational Approach Toward Protein-DNA Recognition,”PNAS 91:3969-3973 (1994).
Joung et al., “A Bacterial Two-Hybrid Selection System for Studying Protein-DNA and Protein-Protein Interactions,”Proc. Natl. Acad. Sci. U.S.A. 97:7382-7387 (2000).
Joung et al., “Identifying and Modifying Protein-DNA and Protein-Protein Interactions Using a Bacterial Two-Hybrid Selection System,”J. Cell. Biochem. Suppl. 37: pp. 53-57 (2001).
Keegan et al., “Separation of DNA Binding from the Transcription-Activating Function of Eukaryotic Regulatory Protein,”Science 231:699-704 (1986).
Kornacker et al., “Gene Activation by the AraC Protein Can Be Inhibited by DNA Looping Between AraC and a LEXA Repressor That Interacts with AraC: Possible Applications as a Two-Hybrid System,”Molecular Biology 30(3):615-624 (1998).
Ma et al., “Converting a Eukaryotic Transcriptional Inhibitor into an Activator,”Cell 55:443-446 (1988).
Phizicky et al., “Protein-Protein Interactions: Methods for Detection and Analysis,”Microbiol. Rev. 59:94-123 (1995).
Rebar et al., “Phage Display Methods for Selecting Zinc Finger Proteins with Novel DNA-Binding Specificities,”Methods Enzymol. 267:129-149 (1996).
Sera and Schultz, “In Vivo Selection of Basic Region-Leucine Zipper Proteins with Altered DNA-Binding Specificaties,”PNAS 93:2920-2925 (1996).
Serebriiskii et al., “A Two-Hybrid Dual Bait System to Discriminate Specificity of Protein Interactions,”J. Biol Chem. 274:17,080-17,087 (1999).
Smith et al., “Phage Display,”Chem. Rev. 97:391-410 (1997).
Uetz et al., “A Comprehensive Analysis of Protein-Protein Interactions inSaccharomyces cerevisiae,” Nature 403:623-627 (2000).
Vojtek et al., “Mammalian Ras Interacts Directly With the Serine/Threonine Kinase Raf,”Cell 74:205-214 (1993).
Walhout et al., “Protein Interaction Mapping inC. elegansUsing Proteins Involved in Vulval Development,”Science 287:116-122 (2000).

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Methods and compositions for interaction trap assays does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Methods and compositions for interaction trap assays, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Methods and compositions for interaction trap assays will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-3828267

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.