Methods and apparati using single polymer analysis

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C536S023100, C536S024300

Reexamination Certificate

active

07371520

ABSTRACT:
The invention relates to methods for analyzing and characterizing single polymers such as nucleic acid molecules. In preferred embodiments, the single molecules are analyzed using single molecule detection and analysis systems.

REFERENCES:
patent: 4707797 (1987-11-01), Briggs
patent: 4793705 (1988-12-01), Shera
patent: 4979824 (1990-12-01), Mathies et al.
patent: 4988617 (1991-01-01), Landegren et al.
patent: 5200313 (1993-04-01), Carrico
patent: 5332666 (1994-07-01), Prober et al.
patent: 5356776 (1994-10-01), Kambara et al.
patent: 5422271 (1995-06-01), Chen et al.
patent: 5538848 (1996-07-01), Livak et al.
patent: 5538898 (1996-07-01), Wickramasinghe et al.
patent: 5565323 (1996-10-01), Parker et al.
patent: 5612181 (1997-03-01), Fourmentin-Guilbert
patent: 5652099 (1997-07-01), Conrad
patent: 5654419 (1997-08-01), Mathies et al.
patent: 5707797 (1998-01-01), Windle
patent: 5710264 (1998-01-01), Urdea et al.
patent: 5807677 (1998-09-01), Eigen et al.
patent: 5858671 (1999-01-01), Jones
patent: 5912127 (1999-06-01), Narod et al.
patent: 5928869 (1999-07-01), Nadeau et al.
patent: 6007987 (1999-12-01), Cantor et al.
patent: 6020126 (2000-02-01), Carlsson et al.
patent: 6090552 (2000-07-01), Nazarenko et al.
patent: 6103476 (2000-08-01), Tyagi et al.
patent: 6106476 (2000-08-01), Corl et al.
patent: 6150089 (2000-11-01), Schwartz
patent: 6210896 (2001-04-01), Chan
patent: 6221592 (2001-04-01), Schwartz et al.
patent: 6225055 (2001-05-01), Bensimon et al.
patent: 6225067 (2001-05-01), Rogers
patent: 6246046 (2001-06-01), Landers et al.
patent: 6248537 (2001-06-01), Bensimon et al.
patent: 6263286 (2001-07-01), Gilmanshin et al.
patent: 6287765 (2001-09-01), Cubicciotti
patent: 6287772 (2001-09-01), Stefano et al.
patent: 6294136 (2001-09-01), Schwartz
patent: 6344319 (2002-02-01), Bensimon et al.
patent: 6355420 (2002-03-01), Chan
patent: 6383740 (2002-05-01), Collins
patent: 6403311 (2002-06-01), Chan
patent: 6673536 (2004-01-01), Stoughton et al.
patent: 6696022 (2004-02-01), Chan et al.
patent: 6762059 (2004-07-01), Chan et al.
patent: 6767731 (2004-07-01), Hannah
patent: 6772070 (2004-08-01), Gilmanshin et al.
patent: 6790671 (2004-09-01), Austin et al.
patent: 6927065 (2005-08-01), Chan et al.
patent: 7262859 (2005-08-01), Chan et al.
patent: 2002/0037506 (2002-03-01), Lin et al.
patent: 2002/0039737 (2002-04-01), Chan et al.
patent: 2002/0110818 (2002-08-01), Chan
patent: 2002/0119455 (2002-08-01), Chan
patent: 2002/0187508 (2002-12-01), Wong
patent: 2002/0197639 (2002-12-01), Shia et al.
patent: 2003/0008414 (2003-01-01), Nie et al.
patent: 2003/0059822 (2003-03-01), Chan et al.
patent: 2003/0129611 (2003-07-01), Bao et al.
patent: 2003/0165929 (2003-09-01), Rigler et al.
patent: 2003/0215864 (2003-11-01), Gilmanshin et al.
patent: 2003/0235854 (2003-12-01), Chan
patent: 2004/0009612 (2004-01-01), Zhao et al.
patent: 2004/0053399 (2004-03-01), Gilmanshin
patent: 2004/0086879 (2004-05-01), Li et al.
patent: 2004/0166025 (2004-08-01), Chan et al.
patent: 2004/0175732 (2004-09-01), Rana et al.
patent: 2004/0214211 (2004-10-01), Gilmanshin et al.
patent: 2004/0235014 (2004-11-01), Nadel et al.
patent: 2005/0042665 (2005-02-01), Gilmanshin
patent: 2005/0074788 (2005-04-01), Dahlberg et al.
patent: 2005/0112595 (2005-05-01), Zhao et al.
patent: 2005/0112606 (2005-05-01), Fuchs et al.
patent: 2005/0112620 (2005-05-01), Chan
patent: 2005/0112671 (2005-05-01), Maletta et al.
patent: 2005/0123944 (2005-06-01), Neely et al.
patent: 2005/0123974 (2005-06-01), Gilmanshin et al.
patent: 2005/0142595 (2005-06-01), Maletta et al.
patent: 2005/0153354 (2005-07-01), Gilmanshin et al.
patent: 2005/0196790 (2005-09-01), Rooke et al.
patent: 2005/0221408 (2005-10-01), Nalefski et al.
patent: 2006/0078915 (2006-04-01), Fuchs et al.
patent: 2006/0134679 (2006-06-01), Larson et al.
patent: 2006/0160209 (2006-07-01), Larson et al.
patent: 2006/0160231 (2006-07-01), Nadel et al.
patent: 2006/0204978 (2006-09-01), Nilsen et al.
patent: 2006/0228747 (2006-10-01), Fuchs et al.
patent: 2006/0286570 (2006-12-01), Rowlen et al.
patent: 2006/0292616 (2006-12-01), Neely et al.
patent: 2006/0292617 (2006-12-01), Neely et al.
patent: 2007/0003950 (2007-01-01), Shen et al.
patent: 2007/0009954 (2007-01-01), Yang et al.
patent: 2007/0031829 (2007-02-01), Yasuno et al.
patent: 2007/0042400 (2007-02-01), Choi et al.
patent: 2007/0042406 (2007-02-01), Yantz et al.
patent: 2007/0042419 (2007-02-01), Barany et al.
patent: 2007/0128083 (2007-06-01), Yantz et al.
patent: 2007/0166743 (2007-07-01), Gilmanshin
patent: 0453301 (1991-10-01), None
patent: 93/22463 (1993-11-01), None
patent: WO98/10097 (1998-03-01), None
patent: WO98/35012 (1998-08-01), None
patent: 98/49344 (1998-11-01), None
patent: WO 00/09757 (2000-02-01), None
patent: WO 01/13088 (2001-02-01), None
patent: 01-90418 (2001-11-01), None
patent: 01/90418 (2001-11-01), None
patent: WO 02/099398 (2002-12-01), None
patent: WO 02/101095 (2002-12-01), None
patent: WO 02/101353 (2002-12-01), None
patent: 03/000933 (2003-01-01), None
patent: WO 03/025540 (2003-03-01), None
patent: WO 03/076655 (2003-09-01), None
patent: WO 03/091455 (2003-11-01), None
patent: WO 03/100101 (2003-12-01), None
patent: WO 2004/007692 (2004-01-01), None
patent: WO 2004/048514 (2004-06-01), None
patent: WO 2004/066185 (2004-08-01), None
patent: WO 2004/091795 (2004-10-01), None
patent: WO 2005/012575 (2005-02-01), None
patent: WO 2005/017205 (2005-02-01), None
patent: WO 2005/022162 (2005-03-01), None
patent: 07/056250 (2007-05-01), None
Lee et al., 1993 “Allelic discrimination by nick-translation PCR with fluorogenic probes” Nucleic Acids Research, vol. 21, No. 16, pp. 3761-3766.
Matthews et al., 1988 “Review: Analytical Strategies for the use of DNA Probes”, Analytical Biochemistry, 169:1-25.
Chen et al., A homogeneous, ligase-mediated DNA diagnostic test. Genome Res. May 1998;8(5):549-56.
Marras et al., Multiplex detection of single-nucleotide variations using molecular beacons. Genet Anal. Feb. 1999;14(5-6):151-6.
Sokol et al., Real time detection of DNA.RNA hybridization in living cells. Proc Natl Acad Sci U S A. Sep. 29, 1998;95(20):11538-43.
Woodage et al., The APCI1307K allele and cancer risk in a community-based study of Ashkenazi Jews. Nat Genet. Sep. 1998;20(1):62-5.
Castro et al., Single-Molecule Electrophoresis: Applications to Biomolecular Detection. SPIE. 1995; 2396:79-85.
Castro et al., Single-molecule detection of specific nucleic acid sequences in unamplified genomic DNA. Anal Chem. Oct. 1, 1997;69(19):3915-20.
D'Antoni et al., Rapid quantitative analysis using a single molecule counting approach. Anal Biochem. May 1, 2006;352(1):97-109.
EkstrØm et al., Two-point fluorescence detection and automated fraction collection applied to constant denaturant capillary electrophoresis. Biotechniques. Sep. 2000;29(3):582-4, 586-9.
Heinze et al., Triple-color conicidence analysis: one step further in following higher order molecular complex formation. Biophys J. Jan. 2004;86(1 Pt 1):506-16.
Korn et al., Gene expression analysis using single molecule detection. Nucleic Acids Res. Aug. 15, 2003;31(16):e89.
Li et al., Ultrasensitive coincidence fluorescence detection of single DNA molecules. Anal Chem. Apr. 1, 2003;75(7):1664-70. Abstract Only.
Shera et al., Detection of single fluorescent molecules. Chem Phys Letts. Nov. 23, 1990;174(6):553-7.
Soper et al., Detection and identification of single molecules in solution. J Opt Soc Am B. 1992; 9(10):1761-9.
Shortreed et al., High-throughput single-molecule DNA screening based on electrophoresis. Anal Chem. Jul. 1, 2000;72(13):2879-85.
Ambrose et al., Application of single molecule detection to DNA sequencing and sizing, Ber. Bunsenges. Phys. Chem. 1993; 97:1535-1542.
Böhmer, Cell division analysis using bromodeoxyuridine-induced suppression of Hoechst 33258 fluorescence. Methods Cell Biol. 1990;33:173-84.
Caplin et al., LightCycler hybridization probes: the most direct way to monitor PCR amplification for quantification and mutation detection. Biochemica. 1999;1:5-8.
Chan et al., DNA mapping us

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Methods and apparati using single polymer analysis does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Methods and apparati using single polymer analysis, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Methods and apparati using single polymer analysis will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-2807661

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.