Method of acquiring a set of specific elements for...

Data processing: measuring – calibrating – or testing – Measurement system in a specific environment – Biological or biochemical

Reexamination Certificate

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C435S006120, C702S020000, C703S011000

Reexamination Certificate

active

08041512

ABSTRACT:
To provide a method of accurately and efficiently acquiring a candidate for a set of discrimination elements for identification. Provided is a method of acquiring a set of specific elements on a specific sequence for discriminating the specific sequence from a number of sequences, including the steps of acquiring a group of alignment data in which each of the number of sequences is subjected to alignment processing, and acquiring a set of elements capable of discriminating the specific sequence through computational processing on the group of alignment data.

REFERENCES:
patent: 7254488 (2007-08-01), Yoshii
patent: 2004/0241643 (2004-12-01), Yamamoto et al.
patent: 2003-280 (2003-01-01), None
patent: 2003-038160 (2003-02-01), None
patent: WO-9710365 (1997-03-01), None
patent: 02/10443 (2002-02-01), None
Thompson et al. et al., Nucleic Acid Research, vol. 25, pp. 4876-4882.
Thompson et al., Nucleic Acids Research, vol. 25, pp. 4876-4882, 1997.
Tyler, E. C., et al., “A Review of Algorithms for Molecular Sequence Comparison”,Computers and Biomedical Research, vol. 24, No. 1 (Feb. 1991), pp. 72-96.
DeSantis, et al., “Comprehensive aligned sequence construction for automated design of effective probes (CASCADE-P) using 16S rDNA”, Bioinformatics, vol. 19, No. 12, 2003, pp. 1461-1468.
Schliep, et al., “Group Testing With DNA Chips: Generating Designs and Decoding Experiments”, Proceedings of the Computational Systems Bioinformatics (CSB '03), 2003, pp. 1-8.

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