Data processing: measuring – calibrating – or testing – Measurement system in a specific environment – Biological or biochemical
Reexamination Certificate
2006-10-17
2006-10-17
Vo, Tim (Department: 2168)
Data processing: measuring, calibrating, or testing
Measurement system in a specific environment
Biological or biochemical
C702S019000, C702S027000
Reexamination Certificate
active
07124034
ABSTRACT:
The objective of the present invention is the efficient analyzation of the structure of an array. By performing the prev(S) calculation for a character string S, if in S, a like variable is present upstream of a second variable, the second variable is changed to a numerical value that indicates the distance to the upstream like variable. But if in S, a like variable is not present upstream of a variable, that variable is changed to “0” to obtain a character string S1. Further, by performing the compl(S) calculation for S, if in the character string S a complementary variable is present upstream of a second variable, the second variable is changed to a numerical value that indicates the distance to the complementary variable. But if in S, a complementary variable is not present upstream of a variable, that variable is changed to “0” to obtain a character string S2.
REFERENCES:
patent: 5369577 (1994-11-01), Kadashevich et al.
Jensen et al., Bioinformatics, vol. 16, pp. 326-333, Apr. 2000.
Eisen, ScanAlyze User Manual, Stanford University, pp. 1-27, 1998-1999.
Dictionary.com, entries for array and complementary, pp. 1 and 2, 2005.
The American Heritage College Dictionary, 4thEd., American Heritage, p. 293, 2004.
Shibuya, Tetsuo,“Constructing the Suffix Tree with a Large Alphabet,” IBM Tokyo Research Laboratory, published Sep. 2, 1999, pp. 25-32.
Kosaraju, et al., “Large-Scale Assembly of DNA Strings and Space-Efficient Construction of Suffix Trees,” Association of Computing Machinery, published 1995, pp. 169-177.
Giegerich, et al., “Efficient Implementation of Lazy Suffix Trees,” Springer-Verlag, Berlin Heidelberg, published 1999, pp. 30-42.
Ly Cheyne D.
Scully , Scott, Murphy & Presser, P.C.
Underweiser, Esq. Marian
Vo Tim
LandOfFree
Method for changing a target array, a method for analyzing a... does not yet have a rating. At this time, there are no reviews or comments for this patent.
If you have personal experience with Method for changing a target array, a method for analyzing a..., we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Method for changing a target array, a method for analyzing a... will most certainly appreciate the feedback.
Profile ID: LFUS-PAI-O-3657473