Method and apparatus for detecting bio-complexes using...

Details Method and apparatus for detecting bio-complexes using... Method and apparatus for detecting bio-complexes using...

2011-01-11

2011-01-11

Lin, Jerry (Department: 1631)

Data processing: measuring, calibrating, or testing

Measurement system in a specific environment

Biological or biochemical

Reexamination Certificate

active

07869960

ABSTRACT:
Provided are a method and apparatus for detecting bio-complexes that are important sub protein interaction networks using a rule-based template in large interaction networks present in a single species. The method includes (a) defining a rule-based template corresponding to a bio-complex to be detected by defining a node that consists of at least one protein, a triplet that consists of two defined nodes and a protein interaction relationship therebetween, and single and composite rules using the triplet and an operator; (b) analyzing the rules of the defined rule-based template by analyzing whether the protein corresponding to the node included in the defined rule-based template and the protein interaction relationship corresponding to the triplet are present in a protein interaction network; and (c) detecting a bio-complex in the protein interaction network by assessing the triplet included in the rules analyzed and the node included in the triplet using a protein interaction relationship and protein of the protein interaction networks.

REFERENCES:
patent: 2000-222421 (2000-08-01), None
patent: 10-2004-0026226 (2004-03-01), None
patent: 1020040055893 (2004-06-01), None
patent: 1020050054377 (2005-06-01), None
patent: 1020060064437 (2006-06-01), None
T. Oyama et al., Extraction of knowledge on protein-protein interaction by association rule discovery, Bioinformatics, vol. 18, No. 5, 2002, pp. 705-714.

Affiliated with

Also associated with

Rating

Method and apparatus for detecting bio-complexes using... does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Method and apparatus for detecting bio-complexes using..., we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Method and apparatus for detecting bio-complexes using... will most certainly appreciate the feedback.

Rate now

Comments { 0 }

Profile ID: LFUS-PAI-O-2728682