Metabolically engineered Saccharomyces cells for the...

Chemistry: molecular biology and microbiology – Micro-organism – per se ; compositions thereof; proces of... – Fungi

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C435S134000, C435S189000, C435S320100, C426S053000, C426S585000, C426S601000, C426S648000, C424S401000

Reexamination Certificate

active

07736884

ABSTRACT:
The present invention relates to the construction and engineering of cells, more particularly microorganisms for producing PUFAs with four or more double bonds from non-fatty acid substrates through heterologous expression of an oxygen requiring pathway.The invention especially involves improvement of the PUFA content in the host organism through fermentation optimization, e.g. decreasing the temperature and/or designing an optimal medium, or through improving the flux towards fatty acids by metabolic engineering, e.g. through over-expression of fatty acid synthases, over-expression of other enzymes involved in biosynthesis of the precursors for PUFAs, or codon optimization of the heterologous genes, or expression of heterologous enzymes involved in the biosynthesis of the precursor for PUFAs.

REFERENCES:
patent: 4582788 (1986-04-01), Erlich
patent: 4683194 (1987-07-01), Saiki et al.
patent: 4683202 (1987-07-01), Mullis
patent: 5057419 (1991-10-01), Martin et al.
patent: 5777201 (1998-07-01), Poutre et al.
patent: 5869304 (1999-02-01), Dickson et al.
patent: 5972664 (1999-10-01), Knutzon et al.
patent: 6025172 (2000-02-01), Dani et al.
patent: 6051755 (2000-04-01), Zou et al.
patent: 6136574 (2000-10-01), Knutzon et al.
patent: 6194167 (2001-02-01), Browse et al.
patent: 6225528 (2001-05-01), Chin et al.
patent: 6355861 (2002-03-01), Thomas
patent: 6372965 (2002-04-01), Lightner et al.
patent: 6403349 (2002-06-01), Mukerji et al.
patent: 6428990 (2002-08-01), Mukerji et al.
patent: 6432684 (2002-08-01), Mukerji et al.
patent: 6441278 (2002-08-01), DeBonte et al.
patent: 6485947 (2002-11-01), Rajgarhia et al.
patent: 6492108 (2002-12-01), Hillman et al.
patent: 6686186 (2004-02-01), Shanklin et al.
patent: 6825335 (2004-11-01), Martin et al.
patent: 6913916 (2005-07-01), Mukerji et al.
patent: 7067285 (2006-06-01), Mukerji et al.
patent: 7109010 (2006-09-01), Rajgarhia et al.
patent: 7125672 (2006-10-01), Picataggio et al.
patent: 7193134 (2007-03-01), Qiu et al.
patent: 7198937 (2007-04-01), Xue et al.
patent: 7208297 (2007-04-01), Mukerji et al.
patent: 7214491 (2007-05-01), Yadav et al.
patent: 7238482 (2007-07-01), Picataggio et al.
patent: 7259255 (2007-08-01), Picataggio et al.
patent: 7267976 (2007-09-01), Yadav et al.
patent: 7273746 (2007-09-01), Yadav et al.
patent: 7465564 (2008-12-01), Zhu et al.
patent: 7504259 (2009-03-01), Yadav et al.
patent: 7537920 (2009-05-01), Renz et al.
patent: 2002/0045232 (2002-04-01), Qiu
patent: 2002/0108147 (2002-08-01), Thomas
patent: 2002/0138874 (2002-09-01), Mukerji et al.
patent: 2002/0151019 (2002-10-01), Shanklin
patent: 2002/0170090 (2002-11-01), Browse et al.
patent: 2003/0004299 (2003-01-01), Srienc et al.
patent: 2003/0066104 (2003-04-01), Lightner et al.
patent: 2003/0074694 (2003-04-01), Lightner et al.
patent: 2003/0159173 (2003-08-01), Wolter et al.
patent: 2003/0172398 (2003-09-01), Browse
patent: 2003/0177508 (2003-09-01), Mukerji et al.
patent: 2003/0180802 (2003-09-01), Kloek et al.
patent: 2004/0049805 (2004-03-01), Lerchl et al.
patent: 2005/0227339 (2005-10-01), Camps Diez et al.
patent: 2006/0078973 (2006-04-01), Renz et al.
patent: 2006/0110806 (2006-05-01), Damude et al.
patent: 2006/0115881 (2006-06-01), Damude et al.
patent: 2006/0168687 (2006-07-01), Renz et al.
patent: 2006/0246556 (2006-11-01), Napier et al.
patent: 0 050 424 (1982-04-01), None
patent: 0 084 796 (1983-08-01), None
patent: 0 201 184 (1986-12-01), None
patent: 0 258 017 (1988-03-01), None
patent: WO 94/11516 (1994-05-01), None
patent: WO 98/46763 (1998-10-01), None
patent: WO 98/46764 (1998-10-01), None
patent: WO 98/46765 (1998-10-01), None
patent: WO 99/27111 (1999-06-01), None
patent: WO 99/33958 (1999-07-01), None
patent: WO 00/34439 (2000-06-01), None
patent: WO 00/40705 (2000-07-01), None
patent: WO 00/55330 (2000-09-01), None
patent: WO 01/02591 (2001-01-01), None
patent: WO 01/04636 (2001-01-01), None
patent: WO 01/14538 (2001-03-01), None
patent: WO 01/20001 (2001-03-01), None
patent: WO 01/44485 (2001-06-01), None
patent: WO 01/59128 (2001-08-01), None
patent: WO 01/75069 (2001-10-01), None
patent: WO 01/79499 (2001-10-01), None
patent: WO 01/85968 (2001-11-01), None
patent: WO 02/08401 (2002-01-01), None
patent: WO 02/26946 (2002-04-01), None
patent: WO 02/34940 (2002-05-01), None
patent: WO 02/44320 (2002-06-01), None
patent: WO 02/072028 (2002-09-01), None
patent: WO 02/077213 (2002-10-01), None
patent: WO 02/081668 (2002-10-01), None
patent: WO 02/081702 (2002-10-01), None
patent: WO 02/090493 (2002-11-01), None
patent: WO 03/012092 (2003-02-01), None
patent: WO 03/064638 (2003-08-01), None
patent: WO 03/072784 (2003-09-01), None
patent: WO 03/102138 (2003-12-01), None
patent: WO 2004/005442 (2004-01-01), None
McDonough, V. M., et al., 1992, “Specificity of unsaturated fatty acid-regulated expression of theSaccharomyces cerevisiaeOLE1 gene”, The Journal of Biological Chemistry, 267(9): 5931-5936.
Huang, Y.-S., et al., 1999, “Cloning of deltal2- and delta6-desaturases fromMortierella alpinaand recombinant production of gamma-linoleic acid inSaccharomyces cerevisiae”, Lipids, 34(7): 649-659.
Wattts, J. L., et al., 2000, “A palmitoyl-CoA-specific delta9 fatty acid desaturase fromCaenorhabditis elegans”, Biochemical and Biophysical Research Communications, 272(1): 263-269.
Chuang, L.-T., et al., 2001, “Effect of conjugated linoleic acid on fungal delta6-desaturase activity in a transformed yeast system”, Lipids, 36(2): 139-143.
Kelder, B., et al., 2001, “Expression of fungal desaturase genes in cultured mammalian cells”, Molecular and Cellular Biochemistry, 219(1): 7-11.
Kajiwara, S., et al., 2002, “Molecular cloning and characterization of the delta9 fatty acid desaturase gene and its promoter fromSaccharomyces kluyveri”, FEMS Yeast Research, 2(3): 333-339.
Domergue, F., et al., Apr. 2003, “New insight intoPhaeodactylum tricornatumfatty acid metabolism. Cloning and functional characterization of plastidial and microsomal delta12-fatty acid desaturases”, Plant Physiology, 131: 1648-1660.
Stephen F. Altschul et al., “Basic Local Alignment Search Tool”, J. Mol. Biol. (1990), vol. 215, pp. 403-410.
Stephen F. Altschul, et al. “Gapped BLAST and PSI-BLAST: a new generation of protein database search programs”, Nucleic Acids Research, 1997, vol. 25, No. 17, pp. 3389-3402.
Frederic Beaudoin, et al., “Heterologous reconstitution in yeast of the polyunsaturated fatty acid biosynthetic pathway”, PNAS, Jun. 6, 2000, vol. 97, No. 12, pp. 6421-6426.
Frederic Domergue, et al. “Acyl Carriers Used as Substrates by the Desaturases and Elongases Involved in Very Long-chain Polyunsaturated Fatty Acids Biosynthesis Reconstituted in Yeast”, The Journal of Biological Chemistry, vol. 278, No. 37, Sep. 12, 2003, pp. 35115-35126.
Naz Erdeniz, et al. “Cloning-Free PCR-Based Allele Replacement Methods”, Genome Research, vol. 7, pp. 1174-1183.
Silvana Gargano, et al. “A Temperature-Sensitive Strain ofHistoplasma capsulatumHas an Altered Δ9—Fatty Acid Desaturase Gene”, Lipids, vol. 30, No. 10, (1995), pp. 899-906.
Nicola Hastings, et al., “A vertebrate fatty acid desaturase with Δ5 and Δ6 acitivities”, PNAS, Dec. 4, 2001, vol. 98, No. 25, pp. 14304-14309.
Patent Abstracts of Japan; Publication No. 2001095588; Publication Date Apr. 10, 2001.
Masataka Kajikawa et al., Isolation and characterization of Δ6-desaturase, an ELO-like enzyme and Δ5-desaturase from the liverwortMarchantia polymorphaand production of arachidonic and eicosapentaenoic acids in the methylotrophic yeastPichia pastoris, Plant Molecular Biology, 2004, vol. 54, pp. 335-352.
Samuel Karlin et al., “Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes”, Poc. Natl. Acad. Sci. USA,, Mar. 1990, vol. 87, pp. 2264-2268.
Samuel Karlin et al., “Applications and statistics for multiple high-sc

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Metabolically engineered Saccharomyces cells for the... does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Metabolically engineered Saccharomyces cells for the..., we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Metabolically engineered Saccharomyces cells for the... will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-4246826

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.