Lactobacillus acidophilus nucleic acids and uses thereof

Drug – bio-affecting and body treating compositions – Whole live micro-organism – cell – or virus containing – Genetically modified micro-organism – cell – or virus

Reexamination Certificate

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C435S189000, C435S252900, C435S252100, C435S069100, C435S006120, C435S320100, C435S325000, C536S023200, C424S093450

Reexamination Certificate

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07468182

ABSTRACT:
Lactobacillus acidophilusNCFM nucleic acid molecules, polypeptides, fragments and variants thereof are provided in the current invention. In addition, fusion proteins, antigenic peptides, and antibodies are encompassed. The invention also provides recombinant expression vectors containing a nucleic acid molecule of the invention and cells comprising the expression vectors. Methods for producing the polypeptides of the invention and methods for their use are further provided.

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Peck et al. (Genbank Accession No. AAV34838).
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Allison and Klaenhammer (1999) “Genetics of bacteriocins produced by lactic acid bacteria and their use in novel industrial applications”in Manual of Industrial Microbiology and Biotechnology. DeMain and Davies (eds.), ASM Press, Washington, D.C., pp. 789-808.
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Altermann et al. (2004) “Identification and phenotypic characterization of the cell-division protein CdpA”Gene342:189-197.
Altermann et al. (2005) “Complete genome sequence of the probiotic lactic acid bacteriumLactobacillus acidophilusNCFM”Proc. Natl. Acad. Sci. U.S.A. Early Edition 10.1073/pnas.0409188102, online publication date Jan. 25, 2005.
Azcarate-Peril et al. (2004) “Identification and inactivation of genetic loci involved withLactobacillus acidophilusacid tolerance”Appl. Environ. Microbiol. 70:5315-5322.
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Barefoot and Klaenhammer (1984) “Purification and characterization of theLactobacillus acidophilusbacteriocin lactacin B”Antimicrob. Agents Chemother. 26:328-334.
Barefoot et al. (1994) “Identification and purification of a protein that induces production of theLactobacillus acidophilusbacteriocin lactacin B”Appl. Environ. Microbiol. 60:3522-3528.
Barrangou et al. (2003) “Functional and comparative genomic analyses of an operon involved in fructooligosaccharide utilization byLactobacillus acidophilus” Proc. Natl. Acad. Sci. U.S.A. 100:8957-8962.
Boels et al. (2001) “Functional analysis of theLactococcus lactis galU andgalE genes and their impact on sugar nucleotide and exopolysaccharide biosynthesis”Appl. Environ. Microbiol. 67:3033-3040.
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GenBank Accession No. AAA19050; Prolinase; Source;Lactobacillus helveticus.
GenBank Accession No. AAA25250; Aminopeptidase C.; Source:Lactobacillus helveticus.
GenBank Accession No. AAB52540; Endopeptidase; Source:Lactobacillus helveticus.
GenBank Accession No. AAB66326; GroEL; Source:Lactobacillus zeae.
GenBank Accession No. AAC29003; cochaperonin GroES; Source:Lactobacillus helveticus.
GenBank Accession No. AAC99363; D-lactate dehydrogenase; Source:Lactobacillus johnsonii.
GenBank Accession No. AAF22492; F1F0-ATPase subunit a; Source:Lactobacillus acidophilus.
GenBank Accession No. AAF22494; F1F0-ATPase subunit b; Source:Lactobacillus acidophilus.
GenBank Accession No. AAF22495; F1F0-ATPase subunit delta; Source:Lactobacillus acidophilus.
GenBank Accession No. AAF22496; F1F0-ATPase subunit alpha; Source:Lactobacillus acidophilus.
GenBank Accession No. AAF22497; F1F0-ATPase subunit gamma; Source:Lactobacillus acidophilus.
GenBank Accession No. AAF22498; F1F0-ATPase subunit beta; Source:Lactobacillus acidophilus.
GenBank Accession No. AAF22499; F1F0-ATPase subunit epsilon; Source:Lactobacillus acidophilus.
GenBank Accession No. AAF75593; GroEL; Source:Lactobacillus johnsonii.
GenBank Accession No. AAK97217; cochaperonin GroES; Source:Lactobacillus acidophilus.
GenBank Accession No. AAK97218; chaperonin GroEL; Source:Lactobacillus acidophilus.
GenBank Accession No. AAK97220; cochaperonin GrpE; Source:Lactobacillus acidophilus.
GenBank Accession No. AAK97221; heat shock protein DnaK; Source:Lactobacillus acidophilus.
GenBank Accession No. AAQ72431; Endopeptidase E2; Source:Lactobacillus helveticus.
GenBank Accession No. AAR25444; Tuf;Lactobacillus johnsonii.
GenBank Accession No. AAT09141; amino acid permease La995; Source:Lactobacillus acidophilus.
GenBank Accession No. AF010281; Lactobacillus zeae GroES; Source:Lactobacillus zeae.
GenBank Accession No. AF031929; Lactobacillus helveticus cochaperonin GroES and chaperonin GroEL genes, complete cds and DNA mismatch repair enzyme (hexA) gene, partial cds; Source:Lactobacillus helveticus.
GenBank Accession No. AF071558; Lactobacillus johnsonii D-lactate dehydrogenase (ldhD) gene, complete cds; Source:Lactobacillus johnsonii.
GenBank Accession No. AF098522; Lactobacillus acidophilus uracil phosphoribosyltransferase; Source:Lactobacillus acidophilus.
GenBank Accession No. AF214488; Lactobacillus johnsonii groESL operon, complete sequence and unknown gene; Source:Lactobacillus johnsonii.
GenBank Accession No. AF300645; Lactobacillus acidophilus groESL operon, complete sequence; Source:Lactobacillus acidophilus.
GenBank Accession No. AF300646; Lactobacillus acid

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