Identification of oligonucleotides for the capture,...

Organic compounds -- part of the class 532-570 series – Organic compounds – Carbohydrates or derivatives

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C435S006120, C435S091100, C435S091200, C536S023100, C536S024330

Reexamination Certificate

active

07807813

ABSTRACT:
West Nile virus capture oligonucleotides, primers and probes derived from conserved regions of the West Nile virus genome are disclosed. Also disclosed are nucleic acid-based assays using the capture oligonucleotides, primers and probes.

REFERENCES:
patent: 5538848 (1996-07-01), Livak
patent: 5939254 (1999-08-01), Ennis
patent: 7390495 (2008-06-01), Despres et al.
patent: WO 02081511 (2002-10-01), None
patent: WO2004/036190 (2004-04-01), None
patent: WO 2004036190 (2004-04-01), None
patent: WO2004/092412 (2004-10-01), None
GenBank Acccession No. M32560, available Jul. 1995, retrieved on-line (www.ncbi.nih.gov
uccore/336165), retrieval date Jun. 5, 2009.
Buck et al., “Design Strategies and Performance of Custom DNA Sequencing Primers,” BioTechniques, Sep. 1999, vol. 27, pp. 528-536.
Anderson, et al. “Isolation of West Nile Virus from Mosquitoes, Crows and a Cooper's Hawk in Connecticut” Science (1999) 286:2331-2333.
Berthet, et al., “Extensive Nucleotide Changes and Deletions within the Envelope Glycoprotein Gene of Euro-African West Nile Viruses”, J. of General Virol. (1997) 78:2293-2297.
Bhatt, et al. “Detection of Nucleic Acids by cycling Probe Technology on Magnetic Particles; High Sensitivity and Ease of Separation” Nucleosides Nucleotides, 18(6-7): 1297-9 (1999).
Briese, et al., “Detection of West Nile Virus Sequences in Cerebrospinal Fluid” The Lancet (2000) 355: 1614-1615.
Brinton, “The Molecular Biology of West Nile Virus: A New Invader of the Western Hemisphere” Ann. Rev. Microbiol. (2002) 56: 371-402.
Buck, et al., “Design strategies and performance of custom DNA sequencing primers” Biotechniques (1999) 27(3) 528-536.
Burt, et al. “Phylogenetic Relationships of Southern African West Nile Virus Isolates”. Emerging Infectious Diseases (2002) 8(8): 820-826.
Busch, et al. “West Nile Virus RNA Dynamics and Antibody Evolution Based on Follow-up of Viremic Blood donors,” Scientific Section, Transfusion, vol. 44, Supplement (2004) P6-030A.
Castle, et al., “Nucleoside Sequence of the 5′-Terminal Untranslated Part of the Genome of the Flavivirus West Nile Virus,” Archives of Virology, 1987, vol. 92, pp. 309-313.
Chin, Andrew, CD-ROM document, entitled “On the Preparation and Utilization of Isolated Purified Oligonucleotides,” Including copy of letter, dated Feb. 17, 2005 from Andrew Chin.
Cline et al.“Gen-Probe Alternative WNV Assay: A TMA-Based Confirmatory Assay for West Nile Virus,” Scientific Section, Transfusion, vol. 44, Supplement (2004) SP368Cline et al.“Gen-Probe Alternative WNV Assay: A TMA-Based Confirmatory Assay for West Nile Virus,” Scientific Section, Transfusion, vol. 44, Supplement (2004) SP368.
King, et al. “Development of a Tqaman PCR assay with internal amplification control for the detection of African swine fever virus,” Journal of Virological Methods, 107: 53-61 (2003).
Lanciotti, et al. “Origin of the West Nile Virus Responsible for an Outbreak of Encephalitis in the Northeastern United States” Science (1999) 286: 2333-2337.
Lanciotti, et al. “Rapid Detection of West Nile Virus from Human Clinical Specimens, Field-Collected Mosquitoes and Avian Samples by A Taqman Reverse Transcriptase-PCT Assay” J. Clin. Microbiol. (2000) 38: 4066-1071.
Lanciotto, et al., “Nucleic Acid Sequence-Based Amplication Assays for Rapid Detection of West Nile and St. Louis Encephalitis Viruses” J. Clin Microbiol. (2001) 39: 4506-4513.
Livak, et al. “Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2-delta, deltaCTMethod,” Methods, 2001, vol. 25, pp. 402-408.
Shyamala, et al. “Performance Characteristics of the Validated and Improved Qualitative and Quantitative Target-Capture for WN NAT Assays,” Scientific Section, Transfusion, vol. 44, Supplement (2004) SP377.
Suzuki, et al. “Poly A-linked non-isotopic microtiter plate reverse transcriptase assay for detection of clinical human immunodeficiency virus isolates” Journal of Virological Methods, 55: 347-356 (1995).
Van Doorn, et al., “HCV RNA detection in heparinized blood by direct genomic RNA capture onto paramagnetic particles” Journal of Virological Methods 48 (1994) 339-341.
Weinberger, et al., Sensitive and accurate quantitation of hepatitis B virus DNA using a kinetic fluorescence detection system (TaqMan PCR), Journal of Virological Methods 85 (2000) 75-82.
Gibson, et al., “A Novel Method for Real Time Quantitative RT-PCR”, genome.cshlp.org, Genome Research, 1996, 6: 995-1001.
“Sequence Detection Systems Quantitative Assay Design and Optimization”, PE Biosystems, pp. 1-8.

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Identification of oligonucleotides for the capture,... does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Identification of oligonucleotides for the capture,..., we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Identification of oligonucleotides for the capture,... will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-4162347

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.