Organic compounds -- part of the class 532-570 series – Organic compounds – Carbohydrates or derivatives
Reexamination Certificate
2006-10-20
2010-10-05
Kim, Young J (Department: 1637)
Organic compounds -- part of the class 532-570 series
Organic compounds
Carbohydrates or derivatives
C435S006120, C435S091100, C435S091200, C536S023100, C536S024330
Reexamination Certificate
active
07807813
ABSTRACT:
West Nile virus capture oligonucleotides, primers and probes derived from conserved regions of the West Nile virus genome are disclosed. Also disclosed are nucleic acid-based assays using the capture oligonucleotides, primers and probes.
REFERENCES:
patent: 5538848 (1996-07-01), Livak
patent: 5939254 (1999-08-01), Ennis
patent: 7390495 (2008-06-01), Despres et al.
patent: WO 02081511 (2002-10-01), None
patent: WO2004/036190 (2004-04-01), None
patent: WO 2004036190 (2004-04-01), None
patent: WO2004/092412 (2004-10-01), None
GenBank Acccession No. M32560, available Jul. 1995, retrieved on-line (www.ncbi.nih.gov
uccore/336165), retrieval date Jun. 5, 2009.
Buck et al., “Design Strategies and Performance of Custom DNA Sequencing Primers,” BioTechniques, Sep. 1999, vol. 27, pp. 528-536.
Anderson, et al. “Isolation of West Nile Virus from Mosquitoes, Crows and a Cooper's Hawk in Connecticut” Science (1999) 286:2331-2333.
Berthet, et al., “Extensive Nucleotide Changes and Deletions within the Envelope Glycoprotein Gene of Euro-African West Nile Viruses”, J. of General Virol. (1997) 78:2293-2297.
Bhatt, et al. “Detection of Nucleic Acids by cycling Probe Technology on Magnetic Particles; High Sensitivity and Ease of Separation” Nucleosides Nucleotides, 18(6-7): 1297-9 (1999).
Briese, et al., “Detection of West Nile Virus Sequences in Cerebrospinal Fluid” The Lancet (2000) 355: 1614-1615.
Brinton, “The Molecular Biology of West Nile Virus: A New Invader of the Western Hemisphere” Ann. Rev. Microbiol. (2002) 56: 371-402.
Buck, et al., “Design strategies and performance of custom DNA sequencing primers” Biotechniques (1999) 27(3) 528-536.
Burt, et al. “Phylogenetic Relationships of Southern African West Nile Virus Isolates”. Emerging Infectious Diseases (2002) 8(8): 820-826.
Busch, et al. “West Nile Virus RNA Dynamics and Antibody Evolution Based on Follow-up of Viremic Blood donors,” Scientific Section, Transfusion, vol. 44, Supplement (2004) P6-030A.
Castle, et al., “Nucleoside Sequence of the 5′-Terminal Untranslated Part of the Genome of the Flavivirus West Nile Virus,” Archives of Virology, 1987, vol. 92, pp. 309-313.
Chin, Andrew, CD-ROM document, entitled “On the Preparation and Utilization of Isolated Purified Oligonucleotides,” Including copy of letter, dated Feb. 17, 2005 from Andrew Chin.
Cline et al.“Gen-Probe Alternative WNV Assay: A TMA-Based Confirmatory Assay for West Nile Virus,” Scientific Section, Transfusion, vol. 44, Supplement (2004) SP368Cline et al.“Gen-Probe Alternative WNV Assay: A TMA-Based Confirmatory Assay for West Nile Virus,” Scientific Section, Transfusion, vol. 44, Supplement (2004) SP368.
King, et al. “Development of a Tqaman PCR assay with internal amplification control for the detection of African swine fever virus,” Journal of Virological Methods, 107: 53-61 (2003).
Lanciotti, et al. “Origin of the West Nile Virus Responsible for an Outbreak of Encephalitis in the Northeastern United States” Science (1999) 286: 2333-2337.
Lanciotti, et al. “Rapid Detection of West Nile Virus from Human Clinical Specimens, Field-Collected Mosquitoes and Avian Samples by A Taqman Reverse Transcriptase-PCT Assay” J. Clin. Microbiol. (2000) 38: 4066-1071.
Lanciotto, et al., “Nucleic Acid Sequence-Based Amplication Assays for Rapid Detection of West Nile and St. Louis Encephalitis Viruses” J. Clin Microbiol. (2001) 39: 4506-4513.
Livak, et al. “Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2-delta, deltaCTMethod,” Methods, 2001, vol. 25, pp. 402-408.
Shyamala, et al. “Performance Characteristics of the Validated and Improved Qualitative and Quantitative Target-Capture for WN NAT Assays,” Scientific Section, Transfusion, vol. 44, Supplement (2004) SP377.
Suzuki, et al. “Poly A-linked non-isotopic microtiter plate reverse transcriptase assay for detection of clinical human immunodeficiency virus isolates” Journal of Virological Methods, 55: 347-356 (1995).
Van Doorn, et al., “HCV RNA detection in heparinized blood by direct genomic RNA capture onto paramagnetic particles” Journal of Virological Methods 48 (1994) 339-341.
Weinberger, et al., Sensitive and accurate quantitation of hepatitis B virus DNA using a kinetic fluorescence detection system (TaqMan PCR), Journal of Virological Methods 85 (2000) 75-82.
Gibson, et al., “A Novel Method for Real Time Quantitative RT-PCR”, genome.cshlp.org, Genome Research, 1996, 6: 995-1001.
“Sequence Detection Systems Quantitative Assay Design and Optimization”, PE Biosystems, pp. 1-8.
Hong Mei
Kim Young J
Novartis Vaccines and Diagnostics Inc.
Robins Roberta
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