Identification of essential survival genes

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving viable micro-organism

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435 29, 4352521, 4352528, 4352534, 4352544, 4352551, 435440, C12Q 104, C12N 114, C12N 120, C12N 1501

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059768282

ABSTRACT:
A method for identifying a strain having a conditional lethal mutation which is essential for survival when strain is incubated under restrictive growth conditions, and methods of identifying gene products and gene functions thereof.

REFERENCES:
patent: 5756305 (1998-05-01), Timberlake et al.
patent: 5821076 (1998-10-01), Timberlake et al.
Bender et al., "Use of a Screen for Synthetic Lethal and Multicopy Suppressee Mutants to Identify Two New Genes Involved in Morphogenesis in Saccharomyces cerevisiae," Mol. and Cell. Biol., 11:1295-1305, 1991.
Costigan et al., "NHP6A and NHP6B, Which Encode HMG1-Like Proteins, Are Candidates for Downstream Components of the Yeast SLT2 Mitogen-Activated Protein Kinase Pathway," Mol. and Cell. Biol. 14:2391-2403, 1994.
Denison et al., "Mutation in the bimD Gene of Aspergillus nidulans Confers a Conditional Mitotic Block and Sensitivity to DNA Damaging Agents," Genetics, 134:1085-1096, 1993.
Gietz et al., "Improved method for high efficiency transformation of intact yeast cells," Nucleic Acids Research, 20(6):1425, 1992.
Harris et al., Molecular Analysis of Saccharomyces cerevisiae Chromosome I On the Number of Genes and the Identification of Essential Genes Using Temperature-sensitive-lethal Mutations, J. Mol. Biol., 225:53-65 1992.
Hooke, "Temperature-Sensitive Mutants of Bacterial Pathogens: Isolation and Use to Determine Host Clearance and in Vivo Replication Rates," Methods in Enzymology, 235:4458-457, 1994.
Hou et al., "In Vivo Selection of Conditional-lethal Mutations in the Gene Encoding Elongation Factor G of Escherichia coli", Journal of Bacteriorlogy, 176:123-129, (1994).
Inoko et al., "Isolation and characterization of conditional-lethal rho mutants of Escherichia coli", Proc. Natl. Acad. Sci., 74:1162-1166, (1977).
Karrow et al., "The essential Escherichia coli msbA gene, a multicopy suppressor of null mutations in the htrB gene, is related to the universally conserved family of ATP-dependent translocators," Mol. Microbiol., 7(1):69-79, 1993.
Leidich et al., "Temperature-sensitive Yeast GPI Anchoring Mutants gpi2 and gpi3 Are Defective in the Synthesis of -Acetylglucosaminyl phosphatidylinositol," J. Biol. Chem., 270:13029-13035, 1995.
Lodge et al., "Comparison of Myristoyl-CoA:Protein N-Myristoyltransferases from Three Pathogenic Fungi: Cryptococcus neoformans, Histoplasma capsulatum, and Candida albicans," J. Biol. Chem, 28:2996-3009, 1994.
Schmid et al., "Genetic Analysis of Temperature-Sensitive Lethal Mutants of Salmonella typhimurium," Genetics, 123:625-633, 1989.
Smith et al., "Hyphal Tip Extension in Aspergillus nidulans Requires the manA Gene Which Encodes Phosphomannose Isomerase," Mol. and Cell. Biol., 14:6030-6038, 1994.
van Zyl et al., "A General Screen for Mutants of Saccharomyces cerevisiae Deficient in tRNA Biosynthesis," Genetics, 123:55-68, 1989.
Winston, "Mutagenesis of Yeast Cells," Current Protocols in Molecular Biology, Supplement 19, 2:13.3.1-13.3.4, 1992.
Bender et al. Use of a Screen for Synthetic Lethal and Multicopy Suppressor Mutants to Identify Two New Genes involved in Morphogenesis in Saccharomyces cerivisiae. Mol. Cell. Biol. 11: 1295-1305, 1991.
Costigan et al. NHP6A and NHP6B, Which Encode HMG-1 Like Proteins, Are Candidates for Downstream Components of the Yeast SLT2 Mitogen-Activated protein Kinase Pathway. Mol. Cell. Biol. 14: 2391-2403, 1994.
Denison et al. Mutation in the bimD gene of Aspergillus nidulans confers a conditional mitotic block and sensitivity to DNA Damaging Agents. Genetics. 134: 1085-1096, 1993.
Gietz et al. Improved method for high efficiency transformation of intact yeast cells. Nucleic Acids Res. 20(6): 1425, 1992.
Harris et al. Molecular Analysis of Saccharomyces cerevisiae chromosome I on the number of Genes and the Identification of Essential genes using termperature sensitive lethal mutations. J. Mol. Biol. 225: 53-65, 1992.
Hooke. Temperature sensitive mutants of bacterial pathogens: Isolation and use to determine host clearance and in vivo replication rates. Meth. Enzymol. 235: 4458-4457, 1994.
Hou et al. In vivo selection of conditional lethal mutations in the Gene Encoding elongation factor G of Escherichia coli. J. Bacteriol. 176: 123-129, 1994.
Inoko et al. Isolation and characterization of conditional lethal rho mutants of Escherichia coli. PNAS. 74: 1162-1166, 1977.
Karrow et al. The essential Escherichia coli msbA gene, a multicopy suppressor of null mutations in the htrB gene, is related to the universally conserved family of ATP-dependent translocators. Mol. Microbiol. 7(1): 69-79, 1993.
Leidich et al. Temperature sensitive Yeast GPI Anchoring mutants gpi2 and gpi3 are defective in the synthesis of acetylglycosaminyl phosphatidylinositol. J. Biol. Chem. 270: 13029-13035, 1995.
Lodge et al. Comparison of myristoryl-CoA: Protein N-Myristoyltransferases from three pathogenic fungi: Cryptococcus neoformans, Histoplasma capsulatum and Candida albicans. J. Biol Chem. 28: 2996-3009, 1994.
Schmid et al. Genetic analysis of temperature sensitive lethal mutants of Salmonella typhimurium. Genetics. 123: 625-633, 1989.
Smith et al. Hyphal Tip extension in Aspergillus nidulans requires the manA gene which encodes phosphomannose isomerase. Mol. Cell. Biol. 14:6030-6038, 1994.
van Zyl et al. A general screen for mutants of Saccharomyces cerevisiae deficient in tRNA biosynthesis. Genetics. 123: 55-68, 1989.
Winston. Mutagenesis of yeast cells. Curr. Protocol. in Mol. Biol. Suppl. 9, 2:13.3.1-13.3.4, 1992.

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