Human parvovirus: bocavirus

Organic compounds -- part of the class 532-570 series – Organic compounds – Carbohydrates or derivatives

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C435S091200

Reexamination Certificate

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08071751

ABSTRACT:
Provided herein are sequences of the genomes and encoded proteins of a new human parvovirus, Bocavirus-2, and variants thereof. Also provided are methods of detecting the Bocavirus-2 and diagnosing Bocavirus-2 infection, methods of treating or preventing Bocavirus-2 infection, and methods for identifying anti-Bocavirus-2 compounds.

REFERENCES:
patent: 2007/0160983 (2007-07-01), Paul et al.
patent: 2008/0053205 (2008-03-01), Pollack et al.
patent: WO 2007/057062 (2007-05-01), None
patent: WO2007057062 (2007-05-01), None
Human bocavirus 2 strain W153, complete genome GenBank EU0822131, 2009.
Hernandez J. Virol, 2000, vol. 74(9), pp. 4220-4228.
International Search Report from WO 2009/117615 A3, Dec. 30, 2009, Blood Systems, Inc.
Allander et al., “A virus discovery method incorporating DNase treatment and its application to the identification of two bovine parvovirus species”,Proc. Natl. Acad. Sci. U.S.A., 98(20):11609-11614 (2001).
Allander et al., “Cloning of a human parvovirus by molecular screening of respiratory tract samples”,Proc. Natl. Acad. Sci. U.S.A., 102(36):12891-12896 (2005).
Breitbart et al., “Genomic analysis of uncultured marine viral communities”,Proc. Natl. Acad. Sci. U.S.A., 99(22):14250-14255 (2002).
Breitbart et al., “Metagenomic analyses of an uncultured viral community from human feces”,J Bacteriol., 185(20):6220-6223 (2003).
Cox-Foster et al., “A metagenomic survey of microbes in honey bee colony collapse disorder”,Science(New York, N. Y.), 318(5848):283-287 (2007).
Culley et al., “High diversity of unknown picorna-like viruses in the sea”,Nature, 424(6952):1054-1057 (2003).
Duke et al., “Sequence and structural elements that contribute to efficient encephalomyocarditis virus RNA translation”,J Virol., 66(3):1602-1609 (1992).
Edwards & Rohwer, “Viral metagenomics”,Nat. Rev. Microbiol., 3(6):504-510 (2005).
Fauquet et al., “Virus taxonomy”,8th reports of the International Committee on Taxonomy of Viruses(Academic Press), p. 1162 (2005).
Feng et al., “Clonal integration of a polyomavirus in human Merkel cell carcinoma”,Science(New York, N. Y.), 319(5866):1096-1100 (2008).
Finkbeiner et al., “Metagenomic analysis of human diarrhea: viral detection and discovery”,PLoS Pathogens, 4(2):e 1000011 (2008).
GenBank: DQ401688.1. Theiler's encephalomyelitis virus, complete genome (Mar. 2, 2007). Retrieved from the Internet Aug. 17, 2009 at:<http://www.ncbi.nlm.nih.gov
uccore/89280778> (nucleotides 5192-5206; 6924-6939; 7227-7239; 7304-7317).
Hales et al., “Complete genome sequence analysis of Seneca Valley virus-001, a novel oncolytic picornavirus”,The Journal of General Virology, 89(Pt 5):1265-1275 (2008).
Hellen & de Breyne, “A distinct group of hepacivirus/pestivirus-like internal ribosomal entry sites in members of diverse picornavirus genera: evidence for modular exchange of functional noncoding RNA elements by recombination”,J. Virol., 81(11):5850-5863 (2007).
Hinton & Crabb, “The novel picornavirus Equine rhinitis B virus contains a strong type U internal ribosomal entry site which functions similarly to that of Encephalomyocarditis virus”,The Journal of general virology, 82(Pt 9):2257-2269 (2001).
Hinton et al., “Internal ribosomal entry site-mediated translation initiation in equine rhinitis A virus: similarities to and differences from that of foot-and-mouth disease virus”,J. Virol., 74(24):11708-11716 (2000).
Holtz et al., “Identification of a novel picornavirus related to cosaviruses in a child with acute diarrhea”,Virology Journal, 2008, 5:159 (http://www.virologyj.com/content/5/1/159).
Jones et al., “New DNA viruses identified in patients with acute viral infection syndrome”,J. Virol., 79(13):8230-8236 (2005).
Jones et al., “Discovery of a novel human picornavirus in a stool sample from a pediatric patient presenting with fever of unknown origin”,Journal of Clinical Microbiology, 45(7):2144-2150 (2007).
Kapoor et al., “A highly divergent picornavirus in a marine mammal”,J. Virol., 82(1):311-320 (2008).
Kapoor et al., “A highly prevalent and genetically diversified Picornaviridae genus in South Asian children”,Proc. Natl. Acad. Sci. U.S.A., 105(51):20482-20487 (2008).
Kistler et al., “Pan-viral screening of respiratory tract infections in adults with and without asthma reveals unexpected human coronavirus and human rhinovirus diversity”,The Journal of Infectious Diseases, 196(6):817-825 (2007).
Koonin & Dolja, “Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences”,Crit. Rev. Biochem. Mol. Biol., 28(5):375-430 (1993).
Kozak M., “Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes”,Cell, 44(2):283-292 (1986).
Lamson et al., “MassTag polymerase-chain-reaction detection of respiratory pathogens, including a new rhinovirus genotype, that caused influenza-like illness in New York State during 2004-2005”,The Journal of Infectious Diseases, 194(10):1398-1402 (2006).
Lopez de Quinto & Martinez-Salas, “Interaction of the eIF4G initiation factor with the aphthovirus IRES is essential for internal translation initiation in vivo”,RNA(New York, N. Y.), 6(10):1380-1392 (2000).
Martinez-Salas et al., “New insights into internal ribosome entry site elements relevant for viral gene expression”,The Journal of General Virology, 89(Pt 3):611-626 (2008).
Mason et al., “Identification and characterization of a cis-acting replication element (ere) adjacent to the internal ribosome entry site of foot-and-mouth disease virus”,J. Virol., 76(19):9686-9694 (2002).
Modlin J.F., “Enterovirus déjà vu”,The New England Journal of Medicine, 356(12):1204-1205 (2007).
Morens & Pallansch, “Human enterovirus infections”,Epidemiology, ed Rotbart HA (ASM Press, Washington, D.C.), pp. 3-23 (1995).
Oberste et al., “Molecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification”,J. Virol., 73(3):1941-1948 (1999).
Palacios et al., “A new arenavirus in a cluster of fatal transplant-associated diseases”,The New England Journal of Medicine, 358(10):991-998 (2008).
Pallansch & Roos, “Enteroviruses: polioviruses, coxsackieviruses, echoviruses, and newer enteroviruses”,Fields Virology(Lippincott Williams and Wilkins, Philadelphia, PA) 4th Ed. pp. 723-775 (2001).
Saeed et al., “Epidemiology and clinical findings associated with enteroviral acute flaccid paralysis in Pakistan”,BMC Infectious Diseases, 7:6 (2007).
Saleh et al., “Functional interaction of translation initiation factor eIF4G with the foot-and-mouth disease virus internal ribosome entry site”,The Journal of General Virology, 82(Pt 4):757-763 (2001).
Simmonds et al, “Detection of genome-scale ordered RNA structure (GORS) in genomes of positive-stranded RNA viruses: Implications for virus evolution and host persistence”,RNA(New York, N. Y.), 10(9):1337-1351 (2004).
Solomon & Willison, “Infectious causes of acute flaccid paralysis”,Current Opinion in Infectious Diseases, 16(5):375-381 (2003).
Strikas et al., “Temporal and geographic patterns of isolates of nonpolio enterovirus in the United States, 1970-1983”,The Journal of Infectious Diseases, 153(2):346-351 (1986).
van den Hoogen et al., “A newly discovered human pneumovirus isolated from young children with respiratory tract disease”,Nat. Med., 7(6):719-724 (2001).
van Der Hoek et al., “Identification of a new human coronavirus”,Nat. Med., 10(4):368-373 (2004).
Welch et al., “Detection of en

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