FRT recombination sites and methods of use

Chemistry: molecular biology and microbiology – Plant cell or cell line – per se ; composition thereof;... – Plant cell or cell line – per se – contains exogenous or...

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C536S024200

Reexamination Certificate

active

07736897

ABSTRACT:
Methods and compositions using populations of randomized modified FRT recombination sites to identify, isolate and/or characterize modified FRT recombination sites are provided. The recombinogenic modified FRT recombination sites can be employed in a variety of methods for targeted recombination of polynucleotides of interest, including methods to recombine polynucleotides, assess promoter activity, directly select transformed organisms, minimize or eliminate expression resulting from random integration into the genome of an organism, such as a plant, remove polynucleotides of interest, combine multiple transfer cassettes, invert or excise a polynucleotide, and identify and/or characterize transcriptional regulating regions are also provided.

REFERENCES:
patent: 5658772 (1997-08-01), Odell et al.
patent: 5744336 (1998-04-01), Hodges et al.
patent: 6010884 (2000-01-01), Griffiths et al.
patent: 6051409 (2000-04-01), Hansen et al.
patent: 6114600 (2000-09-01), Ow et al.
patent: 6175058 (2001-01-01), Baszczynski et al.
patent: 6187994 (2001-02-01), Baszczynski et al.
patent: 6262341 (2001-07-01), Baszczynski et al.
patent: 6300545 (2001-10-01), Baszczynski et al.
patent: 6331661 (2001-12-01), Baszczynski et al.
patent: 6410329 (2002-06-01), Hansen et al.
patent: 6455315 (2002-09-01), Baszczynski et al.
patent: 6458594 (2002-10-01), Baszczynski et al.
patent: 6465254 (2002-10-01), Saito et al.
patent: 6528700 (2003-03-01), Baszczynski et al.
patent: 6541231 (2003-04-01), Baszczynski et al.
patent: 6552248 (2003-04-01), Baszczynski et al.
patent: 6573425 (2003-06-01), Baszczynski et al.
patent: 6624297 (2003-09-01), Baszczynski et al.
patent: 6664108 (2003-12-01), Baszczynski et al.
patent: 6696278 (2004-02-01), Carstens
patent: 6720475 (2004-04-01), Baszczynski et al.
patent: 6746870 (2004-06-01), Ow et al.
patent: 6849778 (2005-02-01), Staub et al.
patent: 6911575 (2005-06-01), Baszczynski et al.
patent: 6992235 (2006-01-01), Bode et al.
patent: 7060499 (2006-06-01), Saito et al.
patent: 7074611 (2006-07-01), Chambon et al.
patent: 7102055 (2006-09-01), Baszczynski et al.
patent: 7126041 (2006-10-01), Helmer et al.
patent: 7179599 (2007-02-01), Baszczynski et al.
patent: 7179644 (2007-02-01), Farmer
patent: 7198924 (2007-04-01), Chesnut et al.
patent: 7223601 (2007-05-01), Baszczynski et al.
patent: 7238854 (2007-07-01), Yadav et al.
patent: 7244560 (2007-07-01), Chesnut et al.
patent: 7267979 (2007-09-01), Yadav
patent: 2001/0032341 (2001-10-01), Bode et al.
patent: 2002/0023278 (2002-02-01), Lyznik et al.
patent: 2002/0123145 (2002-09-01), Ow
patent: 2003/0119166 (2003-06-01), Baszczynski et al.
patent: 2003/0226160 (2003-12-01), Baszczynski et al.
patent: 2003/0226164 (2003-12-01), Suttie et al.
patent: 2003/0237107 (2003-12-01), Baszczynski et al.
patent: 2004/0003435 (2004-01-01), Baszczynski et al.
patent: 2004/0005713 (2004-01-01), Baszczynski et al.
patent: 2004/0083500 (2004-04-01), Baszczynski et al.
patent: 2004/0137624 (2004-07-01), Lowe
patent: 2004/0261145 (2004-12-01), Lyznik et al.
patent: 2005/0009182 (2005-01-01), Ow
patent: 2006/0094111 (2006-05-01), Saito et al.
patent: 2006/0195937 (2006-08-01), Baszczynski et al.
patent: 2006/0253939 (2006-11-01), Baszczynski et al.
patent: 2007/0015195 (2007-01-01), Tao et al.
patent: 1 035 208 (1999-05-01), None
patent: 0 939 120 (1999-09-01), None
patent: 1 122 310 (2000-04-01), None
patent: 93/01283 (1993-01-01), None
patent: 93/17116 (1993-09-01), None
patent: 94/17176 (1994-08-01), None
patent: 96/04393 (1996-02-01), None
patent: 97/12046 (1997-04-01), None
patent: 97/13401 (1997-04-01), None
patent: 97/37012 (1997-10-01), None
patent: 99/23202 (1999-05-01), None
patent: 99/25821 (1999-05-01), None
patent: 99/25840 (1999-05-01), None
patent: 99/25841 (1999-05-01), None
patent: 99/25854 (1999-05-01), None
patent: 99/25855 (1999-05-01), None
patent: 99/55851 (1999-11-01), None
patent: 01/07572 (2001-02-01), None
patent: 01/11058 (2001-02-01), None
patent: 01/23545 (2001-04-01), None
patent: 01/85969 (2001-11-01), None
patent: 02/08409 (2002-01-01), None
patent: 03/083045 (2003-10-01), None
Araki, K., et al.; “Targeted integration of DNA using mutant lox sites in embryonic stem cells”; Nucleic Acids Research (1997) 25(4):868-872; Oxford University Press, Oxford, UK.
Baer, A., et al.; “Coping with kinetic and thermodynamic barriers: RMCE, an efficient strategy for the targeted integration of transgenes”; Current Opinion in Biotechnology (2001) 12:473-480; Elsevier Science Ltd; Amsterdam, The Netherlands.
Ow, D., et al.; “Genome Manipulation Through Site-Specific Recombination”; Critical Reviews in Plant Sciences (1995) 14(3):239-261; Taylor and Francis, London, UK.
Schlake, T., et al.; “Use of Mutated FLP Recognition Target (FRT) Sites for the Exchange of Expression Cassettes at Defined Chromosomal Loci”; Biochemistry (1994) 33:12746-12751; American Chemical Society; Washington, DC, US.
Wirth, D., et al.; “Flp-Mediated Integration of Expression Cassettes into FRT-Tagged Chromosomal Loci in Mammalian Cells”; Methods in Molecular Biology (2004) 267:467-476; Humana Press Inc., Totowa, NJ, US.
Kerbach, S., et al.; “Site-Specific recombination inZea mays”; Theor Appl Genet (2005) 111:1608-1616; Springer-Verlag, Berlin/Heidelberg, Germany.
Dale, E., et al.; “Gene transfer with subsequent removal of the selection gene from the host genome”; Proc Natl Acad Sci USA (Dec. 1991) 88:10558-10562; National Academy of Sciences, Washington, DC US.
Lyznik, L.A., et al.; “Activity of yeast FLP recombinase in maize and rice protoplasts”; Nucleic Acids Research (1993) 21(4):969-975; Oxford University Press, Oxford, UK.
Proteau, G., et al.; “The minimal duplex DNA sequence required for site-specific recombination promoted by the FLP protein of yeast in vitro”; Nucleic Acids Research (1986) 14(12):4787-4802; Oxford University Press, Oxford, UK.
Senecoff, J.F., et al.; “The FLP recombinase of the yeast 2-mu m plasmid: Characterization of its recombination site”; Proc Natl Acad Sci USA (Nov. 1985) 82:7270-7274; National Academy of Sciences, Washington, DC US.
Seibler, J., et al.; “Double-Reciprocal Crossover Mediated by FLP-Recombinase: A Concept and an Assay”; Biochemistry (1997) 36:1740-1747; American Chemical Society, Washington, DC US.
Umlauf, S.W., et al.; “The functional significance of DNA sequence structure in a site-specific genetic recombination reaction”; The EMBO Journal (1988) 7(6):1845-1852; IRL Press Limited, Oxford, UK.
Senecoff, J.F., et al.; “DNA Recognition by the FLP Recombinase of the Yeast 2 mu Plasmid, A Mutational Analysis of the FLP Binding Site”; J Mol Biol (1988) 201:405-421; Elsevier Ltd, Amsterdam, The Netherlands.
Kilby, N.J., et al.; “FLP recombinase in transgenic plants: constitutive activity in stably transformed tobacco and generation of marked cell clones inArabidopsis”; The Plant Journal (1995) 8(5):637-652; Blackwell Publishing Ltd, Oxford, UK.
Lloyd, A.M., et al.; “Functional expression of the yeast FLP/FRT site-specific recombination system inNicotiana tabacum”; Mol Gen Genet (1994) 242:653-657; Springer, Berlin/Heidelberg, Germany.
Albert, H., et al.; “Site-specific integration of DNA into wild-type and mutant lox sites place in the plant genome”; The Plant Journal (1995) 7(4):649-659; Blackwell Publishing Ltd, Oxford, UK.
Lyznik, L.A., et al.; “Site-specific recombination for genetic engineering in plants”; Plant Cell Rep (2003) 21:925-932; Springer, Berlin/Heidelberg, Germany.
Sadowski, P.D.; “Site-specific genetic recombination: hops, flips, and flops”; The FASEB Journal (Jun. 1993) 7:760-767; The Federation of American Societies for Experimental Biology, Bethesda, MD US.
Argos, P., et al.; “The integrase family of site-specific recombinases: regional similarities and global diversity”; The EMBO Journal (1986) 5(2):433-440; IRL Press Limited,

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

FRT recombination sites and methods of use does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with FRT recombination sites and methods of use, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and FRT recombination sites and methods of use will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-4246404

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.