Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving transferase
Reexamination Certificate
2000-07-07
2002-11-12
Slobodyansky, Elizabeth (Department: 1652)
Chemistry: molecular biology and microbiology
Measuring or testing process involving enzymes or...
Involving transferase
Reexamination Certificate
active
06479250
ABSTRACT:
The invention relates generally to ligands of the eck receptor and, in particular, to polypeptide ligands termed eck receptor binding proteins (EBPs). Also encompassed by the invention are methods of treatment using eck receptor ligands and soluble eck receptor, and pharmaceutical compositions containing same. A rapid and sensitive method for the detection of receptor binding activity in crude samples is described.
BACKGROUND OF THE INVENTION
Peptide growth and differentiation factors elicit responses in target cells by means of specific interactions with receptors at the cell surface. Growth factor receptors are typically membrane glycoproteins with distinct extracellular, transmembrane, and intracellular domains. The structural segregation of the domains corresponds to function (Ullrich et al.
Cell
61, 203 (1990)); the extracellular domain appears to be responsible for ligand binding and ligand-mediated receptor dimerization (Cunningham et al. Science 254, 821 (1991); Lev et al.
J. Biol. Chem
. 267, 10866 (1992)), while the intracellular domain of the receptor, or the intracellular domain of an accessory element (Takeshita et al.
Science
257, 379 (1992)), is responsible for signal transduction. Much of the specificity of growth factor activity is dictated by the interaction with the binding site on the extracellular domain of the cognate receptor. Chimeric receptors, engineered to contain the extracellular domain of one receptor and the intracellular domain of a second receptor, retain the ligand specificity of the extracellular component (Lehvaslaiho et al.
EMBO J
. 8, 159 (1989)). The downstream signaling pathways activated by such chimeric receptors correspond to those activated by the intracellular component. In many cases soluble forms of receptors, consisting of only the extracellular domains, retain ligand binding activity (Lev et al. ibid; Duan et al.
J. Biol. Chem
. 266, 413 (1991)). Truncated receptors have been identified in serum (Fernandez-Botran
FASEB J
. 5, 2567 (1991)), cell culture supernatants (Zabrecky et al.
J. Biol. Chem
. 266, 1716 (1991)), and have been produced through recombinant techniques (Lev et al. ibid, Duan et al. ibid).
Recent progress in nucleic acid sequencing and amplification technologies has resulted in the identification of an increasing number of genes which code for previously unidentified growth factor receptors (Wilks
Proc. Natl. Acad. Sci. USA
36, 1603 (1989); Lai et al. Neuron 6, 691 (1991)). As a result, there is a demand to develop procedures which can define the biological roles of orphan receptors, including techniques which can identify ligands for these receptors (McConnell et al.
Science
257, 1906 (1992)) Receptor affinity technology is one approach to this problem. This technology may augment existing. strategies for the isolation of novel growth factors, since it allows the detection of ligands when biological responses are subtle or undefined.
Recent reports have suggested that the extracellular domains of receptors can be exploited as growth factor-specific affinity reagents. Bailon et al. (
Biotechnology
5, 1195 (1987)) have shown that the extracellular domain of the IL-2 receptor &agr; subunit can be immobilized on chromatographic media and used for the purification of recombinant IL-2. A genetic fusion of the kit extracellular domain with an alkaline phosphatase enzymatic tag allowed the identification of a cell associated ligand for the receptor (Flanagan et al.
Cell
63, 185 (1990)). Lupu et al. (
Proc. Natl. Acad. Sci. USA
89, 2287 (1992)) have reported the affinity purification of an activity which binds to the immobilized extracellular domain of the erbB-2 gene product.
The eck gene, originally identified by cDNA cloning from a human epithelial cell library, encodes a 130 kDa receptor-like protein-tyrosine kinase (p130
eck
) (Lindberg et al.
Mol. Cell. Biol
. 10, 6316 (1990)). Immunohistochemical and mRNA screening of tissues and cell lines suggest that eck expression is highest in cells of epithelial origin. By analogy with genes encoding other receptor-like protein-tyrosine kinases, eck may be a proto-oncogene and therefore may have a role in carcinogenesis. This potential role for eck is more likely given the frequent involvement of epithelial cells in human cancers. Receptor protein kinases are typically activated through interaction with one or more ligands. However, a ligand capable of activating p130
eck
has not yet been reported. The identification of such a ligand may be important in defining the role of p130
eck
activation in the development of some human cancers.
It is therefore an object of this invention to identify one or more ligands for p130
eck
. The possible role of p130
eck
in the transformation of epithelial cells to a cancerous state suggests that identification of the ligand responsible for receptor activation may have therapeutic implications for some epithelial cell-derived malignancies.
SUMMARY OF THE INVENTION
The present invention generally relates to eck receptor ligands. More particularly, polypeptides which bind specifically to the eck receptor, herein referred to as eck receptor binding proteins (EBPs), are disclosed. EBPs were identified and isolated by affinity chromatography using immobilized extracellular eck receptor. EBPs of the present invention may also induce phosphorylation of the receptor upon binding which may trigger changes in target cell physiology, e.g. cell growth and/or differentiation. EBP has an amino acid sequence substantially as shown in SEQ. ID. NO. 1. In a preferred embodiment, EBP has a portion of the amino acid sequence as shown in SEQ. ID. NO. 1. For example, EBP has an amino acid sequence terminating at position 150.
A polypeptide specifically binding the eck receptor, wherein the polypeptide has substantially the same amino acid sequence as shown in SEQ. ID. NO. 1 and has a methionine residue at position −1 is also included. By way of example, the polypeptide is [Met
−1
] EBP
1-150
or [Met
−1
] EBP
1-159
. Also provided for are DNA sequences encoding same. EBPs may also be analogs which have a portion of the amino acid sequence as shown in SEQ. I.D. NO. 1. Examples of such analogs are EBPs terminating at positions 167, 171 or 180.
The invention also provides for EBP as a product of procaryotic or eucaryotic expression of an exogenous DNA sequence, i.e., eck receptor binding protein is derived from recombinant DNA methods.
A method for detecting receptor binding activity in crude samples by monitoring the binding to an immobilized ligand binding domain of a receptor is also encompassed by the invention.
Pharmaceutical compositions comprising a therapeutically effective amount of an eck receptor ligand are described. Also included is the use of an eck receptor ligand in the treatment of certain types of cancers, particularly those characterized by epithelial cell proliferation. eck receptor ligands may also be used for the treatment of wounds to promote healing, for increasing hematopoiesis, for stimulating the proliferation of hepatocytes and colon crypt cells, and for treating neurological disorders.
The use of therapeutically effective amounts of ligand antagonists or soluble eck receptor for modulating the biological effects of eck receptor ligands is also encompassed by the invention. Such treatments are useful in cancer therapy and in the control of inflammation.
REFERENCES:
patent: 0597503 (1994-05-01), None
patent: WO 9117427 (1991-11-01), None
patent: WO 9207094 (1992-04-01), None
patent: WO 9527060 (1995-10-01), None
Bartley et al., Nature 368, 558-560 (1994).
Shao, et al., J. Biol. Chem. 270, 5636-5641 (1995).
Pandey et al., Science 268, 567-569 (1995).
Takahashi et al., Oncogene 11, 879-883 (1995).
Magal et al., J. Neurosci. Res. 43, 735-744 (1996).
Lindberg,Tyrosine Phosphorylation&Cell Signaling, Cold Springs Harbor, New York, (May 3-May 7, 1995).
Lindberg et al. (Dec. 1990) Molecular and Cellular Biology, vol. 10 (12), pp. 6316-6324.
Bartley Timothy D.
Boyle William J.
Fox Gary M.
Lindberg Richard A.
Magal Ella
Amgen Inc.
Levy Ron K.
Odre Steve M.
Slobodyansky Elizabeth
Winter Robert B.
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