DNA sequencing

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid

Patent

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

435 91, 435803, 436501, 935 77, 935 78, C12Q 168

Patent

active

049943723

ABSTRACT:
This invention relates to processive DNA polymerases and methods for using them.

REFERENCES:
patent: 3444041 (1969-05-01), Spiegelman et al.
patent: 3444042 (1969-05-01), Speigelman et al.
patent: 3661893 (1972-05-01), Spiegelman et al.
patent: 4072574 (1978-02-01), Loeb et al.
patent: 4224408 (1980-09-01), Hung et al.
patent: 4331589 (1982-05-01), Hung et al.
patent: 4363877 (1982-12-01), Goodman et al.
patent: 4394443 (1983-07-01), Weissman et al.
patent: 4395486 (1983-07-01), Wilson et al.
patent: 4483920 (1984-10-01), Gillespie
patent: 4483922 (1984-11-01), Carpenter
patent: 4486539 (1984-12-01), Ranki
patent: 4521509 (1985-06-01), Benkovic et al.
patent: 4555486 (1985-11-01), Bahl et al.
patent: 4556643 (1985-12-01), Paau
patent: 4563419 (1986-01-01), Ranki
patent: 4591565 (1986-05-01), Branner-Jorgensen
patent: 4656127 (1987-04-01), Mundy
patent: 4663283 (1987-05-01), Kleid et al.
patent: 4663290 (1987-05-01), Weis et al.
patent: 4663290 (1987-05-01), Weiss et al.
patent: 4670379 (1987-06-01), Miller
patent: 4675283 (1987-06-01), Roninson
patent: 4683195 (1987-07-01), Mullis et al.
patent: 4683202 (1987-07-01), Mullis
patent: 4707235 (1987-11-01), Englert et al.
patent: 4729947 (1988-03-01), Middendorf et al.
patent: 4767708 (1988-08-01), Minkley
patent: 4786600 (1988-11-01), Kramer et al.
patent: 4795699 (1989-01-01), Tabor et al.
patent: 4795700 (1989-01-01), Dervan et al.
patent: 4800159 (1989-01-01), Mullis et al.
Innis, M. A., et al., Proc. Natl. Acad. Sci. U.S.A., 85:9436-9440, (1988).
Saiki, R. K., et al., Science, 239:487-491, (1988).
Randahl, "Studies on the Structure and Function Phage T7 DNA Polymerase", Department of Medical Chemistry, Karolinska Institute, Stockholm, Sweden, 1984, pp. 20-21, 36-37.
Axelrod et al., "Transportation from Bacteriophage T7 and SP6 RNA Polymerase Promoters in the Presence of 3'-Deoxyribonucleoside 5'-Triphosphate Chain Terminators", Biochemistry, 24:5716-5723, 1985.
Hoog et al., "Nucleotide Sequence of the Thioredoxin Gene from E. coli", Bioscience Reports, 4:917-923, 1984.
Bina-Stein et al., "Rapid Sequence Determination of Late Simian Virus 40 16S mRNA Leader by Using Inhibitors of Reverse Transcriptase", Proc. Natl. Acad. Sci. U.S.A., 76:731-735, 1979.
Smith, "DNA Sequence Analysis by Primed Synthesis", Methods in Enzymology, vol. 65, pp. 560-580, 1980.
Barrell, "Sequence Analysis of Bacteriophage .phi.X174 DNA", Biochemistry of Nucleic Acids II, vol. 17, pp. 125-133, 1978.
Detera et al., "Studies on the Mechanism of E. coli DNA Polymerase I Large Fragment", J. Biol. Chem., 257:9770-9780, 1982.
Kornberg, "DNA Replication", W. H. Freeman & Company, pp. 87-100, 116-124, 127-129, 405, 655-661, 1974.
Banker, "Advances in Dideoxy Sequencing", 72, BioTechniques, 1984.
Engler, "Bacteriophage T7 DNA Replication", J. Biol. Chemistry, 258:11197, 1983.
Kolodner et al., "Replication of Duplex DNA by Bacteriophage T7 DNA Polymerase and Gene 4 Protein is Accompanied by Hydrolysis of Nucleoside 5'-Triphosphates", Proc. Natl. Acad. Sci. U.S.A., vol. 74, No. 4, p. 1525-1529, (1977).
Ollis et al., "Domain of E. coli DNA Polymerase I Showing Sequence Homology to T7 DNA Polymerase", Nature, vol. 313, pp. 818-819, (1985).
Harrison, "Two for the Price of One", Nature, vol. 313, 736-737, (1985).
Randahl et al., "An Improved Purification Method and a Physical Characterization of Phage T7 DNA Polymerase", Eur. J. Biochem., 128, pp. 445-449, (1982).
Nordstrom et al., "Characterization of Bacteriophage T7 DNA Polymerase Purified to Homogeneity by Antithioredoxin Immunoadsorbent Chromatography", Journal of Biological Chemistry, vol. 256, No. 6, pp. 3112-3117, (1981).
Fuller et al., "Initiation of DNA Replication at the Primary Origin of Bacteriophage T7 by Purified Proteins", Journal of Biological Chemistry, vol. 260, No. 5, pp. 3185-3196, 1985.
McClure et al., "The Kinetics and Processivity of Nucleic Acid Polymerases", Methods in Enzymology, vol. 64, pp. 277-297, 1980.
Watson et al., "Recombinant DNA", Cold Spring Harbor Laboratory, 1983.
Gregerson et al., "Processive Nature of Reverse Transciption by Avian Myeloblastosis Virus Deoxyribonucleic Acid Polymerase", Biochemistry, vol. 19, 301-306, (1980).
Berg et al., "The Synthesis of Mixed Polynucleotide Containing Ribo- and Deoxyribonucleotides by Purified Preparations of DNA Polymerase from E. coli", Information Macromolecules--A Symposium, 1963, 467-483.
Barnes, "DNA Sequencing by Partial Ribosubstitution", J. Mol. Biol., 119, 83-99, (1978).
Van de Sande et al., "Studies on Polynucleotides", J. Biol. Chem., vol. 247, No. 19, 6140-6148, (Oct. 10, '72).
Salser, "Nucleotide Sequencing of DNA: Preliminary Characterization of the Products of Specific Cleavages at Guanine or Adenine Residues", PNAS, vol. 69, No. 1, 238-242, (Jan. '72).
Inge-Vechtomov, "Introduction to Molecular Genetics", Visshaya Shkola, Moskow, USSR, (1983), p. 94-97.
Tabor et al., 84, Proc. Nat'l. Acad. Sci., 4767, 1987.
Russel et al., 82, Proc. Nat'l. Acad. Sci., 29, (1985).
Reutimann et al., 82, Proc. Nat'l. Acad. Sci., 6783, (1985).
Lim et al., 163, J. Bacteriol., 311, (1985).
Henning Jacobsen et al., 45, European Journal of Biochemistry, 623, 1974.
Russel et al., 157, J. of Bacteriol., 526, (1984).
Lunn et al., 259, J. Biol. Chem., 10469, (1984).
De Boer, 80, Proc. Nat'l. Acad. Sci., 21, (1983).
Fischer et al., 255, J. Biol. Chem., 7956, (1980).
Adler et al., 254, J. Biol. Chem., 11605, (1979).
Hori et al., 254, J. Biol. Chem., 11598, (1979).
Mark et al., 73, Proc. Nat'l. Acad. Sci., 780, (1976).
Modrich et al., 250, J. Biol. Chem., 5515, (1975).
Sanger et al., 74, Proc. Nat'l. Acad. Sci., U.S.A., 5463, (1977).
Maat et al., 5, Nucleic Acids Research, 4537, (1978).
Mills et al., 76, Proc. Nat'l. Acad. Sci., U.S.A., 2232, (1979).
Lechner et al., 258 J. Biol. Chem. 11174 11185 (1983).
Engler et al., 258 J. Biol. Chem. 11165 (1983).
Tabor et al., Holmgren et al., (ed.) Raven Press (NY) 285 (1986).
Barr et al., 4 BioTechniques 428 (1986).
Tabor et al., 82 Proc. Nat'l. Acad. Sci. 1074 (1985).
Studier, 95 Virology 70, (1979).
Das et al., J. Biol. Chem. 254:1227 (1979).
McClure et al., J. Biol. Chem. 250:4073 (1975).
Bambara et al., J. Biol. Chem. 253:413 (1978).
Ollis et al., Nature 313, 762-766 (1985).
Kornberg, pp. 130-135.
Sanger et al., J. Mol. Biol. 94, 441 (1975).
Adler et al., "T7-Induced DNA Polymerase", J. Biol. Chem., vol. 258, No. 11, pp. 6956-6962, 1983.
Michaels et al.,"Contrasting Effects of E. coli Single-stranded DNA Binding Protein on Synthesis by T7 DNA Polymerase and E. coli DNA Polymerase I (Large Fragment), J. Biol. Chem., vol. 261, No. 11, pp. 4847-4854, 1986.
Salser, "Cloning cDNA Sequences: A General Technique for Propagating Eukaryotic Gene Sequences in Bacterial Cells", Genetic Engineering, Chapter 3, p. 53.
Saiki et al., "Enzymatic Amplification of .beta.-Globin Genomic Sequences and Restriction Site Analysis for Diagnosis of Sickle Cell Anemia", Science, vol. 230, pp. 1350-1354, 1985.
Saiki et al., "Analysis of Enzymatically Amplified Beta-Globin and HLA-DQ Alpha DNA with Allele-Specific Oligonucleotide Probes", Nature, vol. 324, pp. 163-166, 1986.
Scharf et al., "Direct Cloning and Sequence Analysis of Enzymatically Amplified Genomic Sequences", Science, vol. 233, 1076-1078, 1986 [see Tab 19].
Gaubatz, "Strategies for Constructing Complementary DNA for Cloning", J. Theor. Biol. vol. 95, pp. 679-696, 1982.
Caton et al., "New Procedure for the Production of Influenza Virus-Specific Double-Stranded DNA's", Nucleic Acids Research, vol. 7, No. 6, pp. 1445-1456, 1979.
Mullis et al., "Specific Synthesis of DNA In Vitro via a Polymerase-Catalyzed Chain Reaction", Methods in Enzymology, vol. 155, pp. 335-350, 1987.
Chien et al., "Deoxyribonucleic Acid Polymerase from the Extreme Thermophile Thermus Aquaticus", J. of Bacteriology, vol. 127, No. 3, pp. 1550-1557, 1976.
P. S. Freemont, et al., "A Domain of the Klenow Fragment of E. Coli: DNA Polymerase I Has Polymerase but no Exonuclease Activity. PROTEINS: Structure, Function, & Genetics 1:66-73 (1986).
Speyer, "Mutagenic DNA Polymerase," Biochem. Biophys. Res. Comm., vol.

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

DNA sequencing does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with DNA sequencing, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and DNA sequencing will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-1143052

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.