DNA enzymes

Organic compounds -- part of the class 532-570 series – Organic compounds – Carbohydrates or derivatives

Reexamination Certificate

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C536S023200, C536S023400

Reexamination Certificate

active

07910710

ABSTRACT:
Methods for the selection of novel signaling allosteric DNA enzymes are provided. In particular, fluorescent signaling allosteric DNA enzymes are described. The selection system is based on the cleavage of an ribonucleotide flanked by a fluorophore modified nucleotide and a quencher modified oligonucleotide. Both cis-acting and trans-acting allosteric DNA enzymes are identified, as well as aptamer/DNA enzyme conjugates.

REFERENCES:
patent: 6706474 (2004-03-01), Lu et al.
patent: 6773885 (2004-08-01), Walder et al.
patent: WO 96/17086 (1996-06-01), None
patent: WO 98/27104 (1998-06-01), None
Li et al., A Highly Sensitive and Sective Catalytic DNA Biosensor for Lead Ions, J. Am. Chem. Soc. 2000, 122, pp. 10466-10467.
Milan N. Stojanovic et al.; Homogeneous assays based on deoxyribozyme catalysis; Nucleic Acids Research; 2000, vol. 28, No. 15; pp. 2915-2918; Oxford University Press.
Alison V. Todd et al.; DzyNA-PCR: Use of DNAzymes to Detect and Quantify Nucleic Acid Sequences in a Real-Time Fluorescent Format; Clinical Chemistry, 2000, vol. 46, No. 5, pp. 625-630; American Association for Clinical Chemistry.
Shirley H. J. Mei et al.; An Efficient RNA-Cleaving DNA Enzyme that Synchronizes Catalysis with Fluorescence Signaling; Journal of the American Chemical Society; Jan. 15, 2003; vol. 125, No. 2, pp. 412-420; Published on the Web Dec. 13, 2002.

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