Detection of minimal numbers of neoplastic cells carrying DNA tr

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid

Patent

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

536 27, 935 77, 935 78, C12Q 168, C07H 1512, C12N 1500

Patent

active

050249347

ABSTRACT:
The present invention related to a sensitive method of detecting t(14;18) translocations arising from variable breakpoints in the J-region of the immunoglobulin heavy chain locus on chromosome 14. These breakpoints are typical abnormalities of human follicular lymphomas. In particular, the invention utilizes a sequence amplification by polymerase chain reaction in which primers are synthesized which are so designed that one primer will always flank the breakpoint in the J-region regardless of variation in the breakpoint. Consequently, the invention is a highly sensitive tool to detect minimal residual cells carrying the t(14;18) and has potential to identify patients with subclinical disease.

REFERENCES:
patent: 4683202 (1987-07-01), Mullis
International Search Report, Appl. No. PCT/US 89/00843, International Filing Date Mar. 2, 1989, Priority Date Claimed Mar. 14, 1988.
Crescenzi et al., Proc. Natl. Acad. Sci. USA, vol. 85, pp. 4869-4873, Jul. 1988, "Thermostable DNA Polymerase Chain Amplification of t(14;18) Chromosome Breakpoints and Detection of Minimal Residual Disease".
Stetler-Stevenson et al., Chemical Abstracts, vol. 110, No. 3, 147, Abstract No. 19393s, "Detection of Occult Follicular Lymphoma by Specific DNA Amplification".
Raffeld et al., Chemical Abstracts, vol. 107, No. 5, 186, Aug. 3, 1987, Abstract No. 34198p, "Clonal Evolution of t(14;18) Follicular Lymphomas Demonstrated by Immunoglobulin Genes and the 18q21 Major Breakpoint Reg.".
Raffeld, et al., Cancer Res., vol. 47, pp. 2537-2542 (1987), "Clonal Evolution of t(14;18) Follicular Lymphomas Demonstrated by Immunoglobulin Genes and the 18q21 Major Breakpoint Region".
Stetler-Stevenson, M. et al., Blood, vol. 72, "Detection of Occult Follicular Lymphoma by Specific DNA Amplification", pp. 1822-1825 (1988).
Hu et al, Detection of B-Cell Lymphoma in Peripheral Blood by DNA Hybridisation, The Lancet, Nov. 16, 1985, pp. 1092-1095.
Cleary et al., Immunoglobulin Gene Rearrangement as a Diagnostic Criterion of B-cell Lymphoma, Proc. Natl. Acad. Sci., USA, vol. 81, pp. 593-597.
Lee et al., Detection of Minimal Residual Cells Carrying the t(14;18) by DNA Sequence Amplification, Science, vol. 237, Jul. 1987.
Saiki et al., Primer-Directed Enzymatic Amplification of DNA with a Thermostable DNA Polymerase, Science, vol. 239, Jan. 1988, pp. 487-491.
Stoflet et al., Genomic Amplification with Transcript Sequencing, Science, vol. 239, Jan. 1988, pp. 491-494.
Mullis et al., Specific Enzymatic Amplification of DNA in Vitro: The Polymerase Chain Reaction, Cold Spring Harbor Symposia on Quantitative Biology, vol. LI, 1986, pp. 263-273.
Scharf et al., Direct Cloning and Sequence Analysis of Enzymatically Amplified Genomic Sequences, Science, vol. 233, Sep. 1986, pp. 1076-1078.
Bialy et al., Amplified Genes and Frame-Shift Mutations, Bio/Technology, vol. 5, Dec. 1987, pp. 1268.
Wrischnik et al., Length Mutations in Human Mitochondrial DNA: Direct Sequencing of Enzymatically Amplified DNA, Nucleic Acids Research, vol. 15, No. 2, 1987, pp. 529-543.
Impraim et al., Analysis of DNA Extracted from Formalin-Fixed, Paraffin-Embedded Tissues by Enzymatic Amplification and Hybridization with Sequence-Specific Oligonucleotides, Biochemical and Biophysical Research Communications, vol. 142, No. 3, 1987, pp. 710-716.
Rollo et al., Polymerase Chain Reaction Fingerprints, Nucleic Acids Research, vol. 15, No. 21, 1987, pp. 9094.
Saiki et al., Analysis of Enzymatically Amplified B-Globin and HLA-DQa DNA with Allele-Specific Oligonucleotide Probes, Nature, vol. 324, Nov. 13, 1986, pp. 163-166.
Lee et al., The Gene Located at Chromosome 18 Band q21 is Rearranged in Uncultured Diffuse Lymphomas as Well as Follicular Lymphomas, Blood, vol. 70, No. 1, Jul. 1987, pp. 90-95.
Weiss et al., Molecular Analysis of the t(14;18) Chromosomal Translocation in Malignant Lymphomas, The New England Journal of Medicine, vol. 317, No. 19, Nov. 5, 1987, pp. 1185-1189.
Tsujimoto et al., The t(14;18) Chromosome Translocations Involved in B-Cell Neoplasms Result from Mistakes in VDJ Joining, Science, vol. 229, Sep. 1985, pp. 1390-1393.
Ravetch et al., Structure of the Human Immunoglobulin u Locus: Characterization of Embryonic and Rearranged J and D Genes, Cell, vol. 27, Dec. 1981, pp. 583-591.
Tsujimoto et al., Analysis of the Structure, Transcripts, and Protein Products of bel-2, The Gene Involved in Human Follicular Lymphoma, Proc. Natl. Acad. Sci., USA 83 (1986), pp. 5214-5218.
Cleary et al., Cloning and Structural Analysis of cDNAs for bcl-2 and a Hybrid bcl-2/Immunoglobulin Transcript Resulting from the t(14;18) Translocation, Cell, vol. 47, Oct. 10, 1986, pp. 19-28.
Bakhshi et al., Mechanism of the t(14;18) Chromosomal Translocation: Structural Analysis of Both Derivative 14 and 18 Reciprocal Partners, Proc. Natl. Acad. Sci. USA, vol. 84, Apr. 1987, pp. 2396-2400.
Whang-Peng et al., Clinical Implications of Cytogenetic Variants in Chronic Myelocytic Leukemia (CML), Blood, vol. 32, No. 5, Nov. 1968, pp. 755-766.
Groffen et al., Philadelphia Chromosomal Breakpoints are Clustered within a Limited Region, bcr, on Chromosome 22, Cell, vol. 36, Jan. 1984, pp. 93-99.
Heisterkamp et al., Structural Organization of the bcr Gene and its Role in the Ph' Translocation, Nature, vol. 315, Jun. 1985, pp. 758-761.
Heisterkamp et al., Localization of the c-abl Oncogene Adjacent to a Translocation Break Point in Chronic Myelocytic Leukaemia, Nature, vol. 306, Nov. 17, 1983, pp. 239-242.
Shtivelman et al., Alternative Splicing of RNAs Transcribed from the Human abl Gene and from the bcr-abl Fused Gene, Cell, vol. 47, Oct. 24, 1986, pp. 277-284.
Shtivelman et al., ber-abl RNA in Patients with Chronic Myelogenous Leukemia, Blood, vol. 69, Mar. 1987, pp. 971-973.
Berk et al., Sizing and Mapping of Early Adenovirus mRNAs by Gel Electrophoresis of S1 Endonuclease-Digested Hybrids, Cell, vol. 12, Nov. 1977, pp. 721-732.
Ando, A Nuclease Specific for Heat-Denatured DNA Isolated from A Product of Aspergillus oryzae, Biochimica Et Biophysica Acta, 114, 1966, pp. 158-168.
Tsujimoto et al., Involvement of the bcl-2 Gene in Human Follicular Lymphoma, Science, vol. 228, Jun. 21, 1985, pp. 1440-1443.
Fukuhara et al., Chromosome Abnormalities in Poorly Differentiated Lymphocytic Lymphoma, Cancer Research, vol. 39, Aug. 1979, pp. 3119-3128.
Yunis et al., Distinctive Chromosomal Abnormalities in Histologic Subtypes of Non-Hodgkin's Lymphoma, The New England Journal of Medicine, vol. 307, No. 20, Nov. 11, 1982, pp. 1231-1236.
Bloomfield et al., Nonrandom Abnormalities in Lymphoma, Cancer Research, vol. 43, Jun. 1983, pp. 2975-2984.
Tsujimoto et al., Cloning of the Chromosome Breakpoint of Neoplastic B Cells with the t(14;18) Chromosome Translocation, Science, vol. 226, Nov. 30, 1984, pp. 1097-1099.
Bakshi et al., Cloning the Chromosomal Breakpoint of t(14;18) Human Lymphomas: Clustering Around J.sub.H on Chromosome 14 and Near a Transcriptional Unit on 18, Cell, vol. 41, Jul 1985, pp. 899-906.
Cleary et al., Nucleotide Sequence of a t(14;18) Chromosomal Breakpoint in Follicular Lymphoma and Demonstration of a Breakpoint-Cluster Region Near a Transcriptionally Active Locus on Chromosome 18, Proc. Natl. Acad. Sci, USA, vol. 82, Nov. 1985, pp. 7439-7443.
Saiki et al., Enzymatic Amplification of B-Globin Genomic Sequences and Restriction Site Analysis for Diagnosis of Sickle Cell Anemia, Science, vol. 230, Dec. 20, 1985, pp. 1350-1354.
Smith et al., Ciculating Monoclonal B Lymphocytes in Non-Hodgkin's Lymphoma, The New England Journal of Medicine, vol. 311, No. 23, Dec. 6, 1984, pp. 1476-1481.
Kozma et al., "The Human c-Kirsten Ras Gene Is Activated By a Novel Mutation In Codon 13 In the Breast Carcinoma Cell Line MDA-MB231," Nucleic Acids Research, vol. 15, No. 15, 1987, pp. 5963-5971.

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Detection of minimal numbers of neoplastic cells carrying DNA tr does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Detection of minimal numbers of neoplastic cells carrying DNA tr, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Detection of minimal numbers of neoplastic cells carrying DNA tr will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-145315

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.