Derivative nucleic acids and uses thereof

Details Derivative nucleic acids and uses thereof Derivative nucleic acids and uses thereof

2005-11-15

2005-11-15

Fredman, Jeffrey (Department: 1634)

Chemistry: molecular biology and microbiology

Measuring or testing process involving enzymes or...

Involving nucleic acid

C435S302100, C435S252800, C435S174000, C435S183000, C382S129000, C382S133000, C382S153000, C382S173000, C382S286000, C382S291000, C702S019000, C702S022000, C536S022100

Reexamination Certificate

active

06964847

ABSTRACT:
The invention features a method for multiplexed analysis of a plurality of target nucleic acid sequences in a sample. The method provides a derivative nucleic acid for each target sequence analyzed and present in the sample.

REFERENCES:
patent: 5104792 (1992-04-01), Silver et al.
patent: 5422252 (1995-06-01), Walker et al.
patent: 5445934 (1995-08-01), Fodor et al.
patent: 5503980 (1996-04-01), Cantor
patent: 5508169 (1996-04-01), Deugau et al.
patent: 5552270 (1996-09-01), Khrapko et al.
patent: 5631134 (1997-05-01), Cantor
patent: 5700637 (1997-12-01), Southern
patent: 5714320 (1998-02-01), Kool
patent: 5770365 (1998-06-01), Lane et al.
patent: 5846717 (1998-12-01), Brow et al.
patent: 5858989 (1999-01-01), Babiuk et al.
patent: 5871911 (1999-02-01), Dahlberg et al.
patent: 5876924 (1999-03-01), Zhang et al.
patent: 5888780 (1999-03-01), Dahlberg et al.
patent: 5935793 (1999-08-01), Wong
patent: 5942391 (1999-08-01), Zhang et al.
patent: 5985557 (1999-11-01), Prudent et al.
patent: 5994069 (1999-11-01), Hall et al.
patent: 6001567 (1999-12-01), Brow et al.
patent: 6103474 (2000-08-01), Dellinger
patent: 6255081 (2001-07-01), Matsui
patent: 6261797 (2001-07-01), Sorge
patent: 0373203 (1994-08-01), None
patent: WO 96/15271 (1996-05-01), None
patent: WO 97/45559 (1997-12-01), None
patent: WO 98/35058 (1998-08-01), None
Broude et al., “Enhanced DNA Sequencing by Hybridization”, Proc. Natl. Acad. Sci. USA, vol. 91, pp. 3072-3076, 1994.
Pastinen et al., “Minisequencing: A Specific Tool for DNA Analysis and Diagnostics on Oligonucleotide Arrays”, Genome Research, 7:606-614, 1997.
Brownie et al., “The Elimination of Primer-Dimer Accumulation in PCR”, Nucleic Acids Research, vol. 25, No. 16, pp. 3235-3241, 1997.
Bukanov et al., “PD-loop: A complex of duplex DNA with an oligonucleotide”,Proc. Natl. Acad. Sci. USA 95:5516-5520 (1998).
Cargill et al., “Characterization of single-nucleotide polymorphisms in coding regions of human genes”,Nature Genetics 22:231-238 (1999).
Drobyshev et al., “Sequence analysis by hybridization with oligonucleotide microchip: indentification of β-thalassemia mutations”,Gene 188:45-52 (1997).
Dubiley et al., “Fractionation, phosphorylation and ligation on oligonucleotide microchips to enhance sequencing by hybridization”,Nucl. Acids Res. 25:2259-2265 (1997).
Favis et al., “Universal DNA array detection of small insertions and deletions in BRCA1 and BRCA2”,Nature Biotechnology 18:561-564 (2000).
Griffin et al., “Direct genetic analysis by matrix-assisted laser desorption/ionization mass spectrometry”,Proc. Natl. Acad. Sci. USA 96:6301-6306 (1999).
Gunderson et al., “Mutation Detection by Ligation to Completen-mer DNA Arrays”,Genome Research 8:1142-1153 (1998).
Isaksson and Landegren, “Accessing genomic information: alternatives to PCR”,Current Opinion in Biotechnology 10:11-15 (1999).
Kuhn et al., “An Experimental Study of Mechanism and Specificity of Peptide Nucleic Acid (PNA) Binding to Duplex DNA”,J. Mol. Biol.286:1337-1345 (1999).
Livshits and Mirzabekov, “Theoretical Analysis of the Kinetics of DNA Hybridization with Gel-Immobilized Oligonucleotides”,Biophysical Journal 71:2795-2801 (1996).
Mir and Southern, “Determining the influence of structure on hybridization using oligonucleotide arrays”,Nature Biotechnology 17:788-792 (1999).
Ryan et al, “Non-PCR-Dependent Detection of the Factor V Leiden Mutation From Genomic DNA Using a Homogeneous Invader Microtiter Plate Assay”,Molecular Diagnosis 4:135-144 (1999).
Thomas et al., “Amplification of Padlock Probes for DNA Diagnostics by Cascade Rolling Circle Amplification or the Polymerase Chain Reaction”,Arch Pathol Lab Med 123:1170-1176 (1999).
Timofeev et al., “Regioselective immobilization of short oligonucleotides to acrylic copolymer gels”,Nucl. Acids Res. 24:3142-3148 (1996).
Wang et al., “Large-Scale Identification, Mapping, and Genotyping of Single-Nucleotide Polymorphisms in the Human Genome”,Science 280:1077-1082 (1998).
Yershov et al., “DNA analysis and diagnostics on oligonucleotide microchips”,Proc. Natl. Acad. USA 93:4913-4918 (1996).
Zhang et al., “Amplification of target-specific, ligation-dependent circular probe”,Gene 211:277-285 (1998).
Newton and Graham: “PCR” 1994, Spektrum Akademischer Verlag, Heidelberg, XP002299813, p. 70-71, Figure 4.1.
Supplemental European Search Report for EP Application No. 00 95 0341, dated Oct. 8, 2004.

Affiliated with

Also associated with

Rating

Derivative nucleic acids and uses thereof does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Derivative nucleic acids and uses thereof, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Derivative nucleic acids and uses thereof will most certainly appreciate the feedback.

Rate now

Comments { 0 }

Profile ID: LFUS-PAI-O-3502243