Computing method and apparatus for a many-body problem

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G06F 1700

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055965113

ABSTRACT:
A proximal particle list including numbers of particles located within a predetermined distance from a particular particle is generated in calculating a Coulomb force acting on a particular particle or a related potential. A van der Waals force acting on the particular particle or a related potential is thereafter calculated based on only the particles included in the proximal particle list.

REFERENCES:
patent: 4908781 (1990-03-01), Levinthal et al.
"FASTRUN: A Special Purpose, Hardwired Computer for Molecular Simulation", Richard Fine et al., PROTEINS: Structure, Function, and Genetics 11:242-253 (1991).
"Grape-2A: A Special Purpose Computer for Simulations of Many-Body Systems With Arbitrary Central Force", Toshikazu Ebisuzaki et al, Proceedings of the 24th Hawaii International Conference on System Sciences, vol. 1, pp. 171-180 (1992).

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