Compounds for the cleavage at a specific position of RNA, oligom

Organic compounds -- part of the class 532-570 series – Organic compounds – Carbohydrates or derivatives

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536 28, 536 29, C07H 2100

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active

050138308

ABSTRACT:
There is disclosed a compound having a double chain which is composed of an RNA (+chain) and a complementary DNA (-chain), wherein a portion of the DNA (-chain) has been replaced by an RNA or a derivative thereof, and wherein, when the compound is subjected to the action of an enzyme having a ribonuclease H activity, it is possible to preferentially cleave the RNA (+chain) in a position corresponding to the unsubstituted portion of the DNA (-chain). The compound can thus be used for the preferential cleavage of a phosphodiester bond in a specific position of RNA. Accordingly, the invention provides a useful means for preparing, for instance, a deletion mutant. There is also disclosed a mixed oligomer which comprises an oligomer of RNA or a derivative thereof and a DNA oligomer, wherein the RNA oligomer or a derivative thereof is conjugated to the DNA oligomer via a phosphate diester linkage between the 5'-hydroxyl group and the 3'-hydroxyl group in the ribose or deoxyribose moiety. There is further disclosed a nucleoside derivative of a given general formula for use as a starting material.

REFERENCES:
patent: 4401796 (1983-08-01), Itakura
patent: 4415732 (1983-11-01), Caruthers et al.
patent: 4503151 (1985-03-01), Paddock
patent: 4661450 (1987-04-01), Kempe et al.
patent: 4725677 (1988-02-01), Koster et al.
Hideo Inoue, et al, Nucleic Acids Research, Symposium Series No. 16, 1985.
Koster, H. et al. N--acyl Protecting Groups for Deoxynucleosides. A Quantitative and Comparative Study (1981).

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