Chemokine receptor binding heterocyclic compounds

Drug – bio-affecting and body treating compositions – Designated organic active ingredient containing – Having -c- – wherein x is chalcogen – bonded directly to...

Reexamination Certificate

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C514S311000, C514S313000, C514S314000, C546S159000, C546S164000, C546S171000

Reexamination Certificate

active

06734191

ABSTRACT:

TECHNICAL FIELD
This invention generally relates to novel compounds, pharmaceutical compositions and their use. This invention more specifically relates to novel heterocyclic compounds that bind to chemokine receptors, including CXCR4 and CCR5, and demonstrate protective effects against infection of target cells by a human immunodeficiency virus (HIV).
BACKGROUND OF THE INVENTION
Approximately 40 human chemokines have been described, that function, at least in part, by modulating a complex and overlapping set of biological activities important for the movement of lymphoid cells and extravasation and tissue infiltration of leukocytes in response to inciting agents (See, for example: P. Ponath,
Exp. Opin. Invest. Drugs,
7:1-18, 1998; Baggiolini, M.
Nature
392, 565-568 (1998); Locati et al.
Annu. Rev. Med.
50, 425- 40 (1999)). These chemotactic cytokines, or chemokines, constitute a family of proteins, approximately 8-10 kDa in size. Chemokines appear to share a common structural motif, that consists of 4 conserved cysteines involved in maintaining tertiary structure. There are two major subfamilies of chemokines: the “CC” or &bgr;-chemokines and the “CXC” or &agr;-chemokines. The receptors of these chemokines are classified based upon the chemokine that constitutes the receptor's natural ligand. Receptors of the &bgr;-chemokines are designated “CCR” while those of the &agr;-chemokines are designated “CXCR”.
Chemokines are considered to be principal mediators in the initiation and maintenance of inflammation (see
Chemokines in Disease
published by Humana Press (1999), Edited by C. Herbert; Murdoch et al.
Blood
95, 3032-3043 (2000)). More specifically, chemokines have been found to play an important role in the regulation of endothelial cell function, including proliferation, migration and differentiation during angiogenesis and re-endothelialization after injury (Gupta et al.,
J. Biol. Chem.,
7:4282-4287 (1998); Volin et al
Biochem. Biophys Res. Commun.
242, 46-53 (1998)). Two specific chemokines have been implicated in the etiology of infection by human innunodeficiency virus (HIV).
In most instances, HIV initially binds via its gp120 envelope protein to the CD4 receptor of the target cell. A conformational change appears to take place in gp120 which results in its subsequent binding to a chemokine receptor, such as CCR5 (Wyatt et al.,
Science,
280:1884-1888 (1998); Rizzuto et al.
Science,
280:1949-1953 (1998); Berger et al.
Annu. Rev. Immunol.
17: 657-700 (1999)). HIV-1 isolates arising subsequently in the infection bind to the CXCR4 chemokine receptor.
Following the initial binding by HIV to CD4, virus-cell fusion results, which is mediated by members of the chemokine receptor family, with different members serving as fusion cofactors for macrophage-tropic (M-tropic) and T cell line-tropic (T-tropic) isolates of HIV-1 (Carroll et al.,
Science,
276: 273-276 1997; Feng et al.
Science
272, 872-877 (1996); Bleul et al.
Nature
382, 829-833 (1996); Oberlin et al.
Nature
382, 833-835 (1996); Cocchi et al.
Science
270, 1811-1815 (1995); Dragic et al.
Nature
381, 667-673 (1996); Deng et al. Nature 381, 661-666 (1996); Alkhatib et al.
Science
272, 1955-1958, 1996). During the course of infection within a patient, it appears that a majority of HIV particles shift from the M-tropic to the more pathogenic T-tropic viral phenotype (Blaak et al.
Proc. Natl. Acad. Sci.
97, 1269-1274 (2000); Miedema et al.,
Immune. Rev.,
140:35 (1994); Simmonds et al.
J. Virol.
70, 8355-8360 (1996); Tersmette et al.
J. Virol.
62, 2026-2032, 1988); Connor, R. I., Ho, D. D.
J. Virol.
68, 4400-4408 (1994); Schuitemaker et al.
J. Virol.
66, 1354-1360 (1992)). The M-tropic viral phenotype correlates with the virus's ability to enter the cell following binding of the CCR5 receptor, while the T-tropic viral phenotype correlates with viral entry into the cell following binding and membrane fusion with the CXCR4 receptor. Clinical observations suggest that patients who possess genetic mutations in CCR5 appear resistant, or less susceptible to HIV infection (Liu et al.
Cell
86, 367-377 (1996); Samson et al.
Nature
382, 722-725 (1996); Michael et al.
Nature Med.
3, 338-340 (1997); Michael et al.
J. Virol.
72, 6040-6047 (1998); Obrien et al.
Lancet
349, 1219 (1997); Zhang et al.
AIDS Res. Hum. Retroviruses
13, 1357-1366 (1997); Rana et al.
J. Virol.
71, 3219-3227 (1997); Theodorou et al.
Lancet
349, 1219-1220 (1997). Despite the number of chemokine receptors which have been reported to HIV mediate entry into cells, CCR5 and CXCR4 appear to be the only physiologically relevant coreceptors used by a wide variety of primary clinical HIV-1 strains (Zhang et al.
J. Virol.
72, 9307-9312 (1998); Zhang et al.
J. Virol.
73, 3443-3448 (1999); Simmonds et al.
J. Virol.
72, 8453-8457 (1988)). Fusion and entry of T-tropic viruses that use CXCR4 are inhibited by the natural CXC-chemokine stromal cell-derived factor-1, whereas fusion and entry of M-tropic viruses that use CCR5 are inhibited by the natural CC-chemokines namely, Regulated on Activation Normal T-cell Expressed and Secreted (RANTES) and Macrophage Inflammatory proteins (MIP-1 alpha and beta).
In addition to serving as a co-factor for HIV entry, the direct interaction of virus-associated gp120 with CXCR4 has been recently suggested as a possible cause of CD8
30
T-cell apoptosis and AIDS-related dementia via induction of neuronal cell apoptosis (Hesselgesser et al.
Curr. Biol.
8, 595-598 (1998); Hesselgesser et al.
Curr. Biol.
7, 112-121 (1997); Hesselgesser et al. “Chemokines and Chemokine receptors in the Brain” in
Chemokines in Disease
published by Humana Press (1999), Edited by C. Herbert; Herbein et al.
Nature
395, 189-194 (1998); Buttini et al.
Nature Med.
4, 441-446 (1998); Ohagen et al.
J. Virol.
73, 897-906 (1999); Biard-Piechaczyk et al.
Virology
268, 329-344 (2000); Sanders et al.
J. Neuroscience Res.
59, 671-679 (2000); Bajetto et al.
J. Neurochem.
73, 2348-2357 (1999); Zheng et al.
J. Virol.
73, 8256-8267 (1999)).
However, the binding of chemokine receptors to their natural ligands appears to serve a more evolutionary and central role than only as mediators of HIV infection. The binding of the natural ligand, pre-B-cell growth-stimulating factor/stromal cell derived factor (PBSF/SDF-1) to the CXCR4 chemokine receptor provides an important signaling mechanism: CXCR4 or SDF-1 knock-out mice exhibit cerebellar, cardiac and gastrointestinal tract abnormalities and die in utero (Zou et al.,
Nature,
393:591-594 (1998); Tachibana et al.,
Nature,
393:591-594 (1998); Nagasawa et al.
Nature
382, 635-638 (1996)). CXCR4-deficient mice also display hematopoietic defects (Nagasawa et al.
Nature
382, 635-638 (1996)); the migration of CXCR4 expressing leukocytes and hematopoietic progenitors to SDF-1 appears to be important for maintaining B-cell lineage and localization of CD34
+
progenitor cells in bone marrow (Bleul et al.
J. Exp. Med.
187, 753-762 (1998); Viardot et al.
Ann. Hematol.
77, 195-197 (1998); Auiti et al.
J. Exp. Med.
185, 111-120 (1997); Peled et al.
Science
283, 845-848 (1999); Qing et al.
Immunity
10, 463-471 (1999); Lataillade et al.
Blood
95, 756-768 (1999); Ishii et al.
J. Immunol.
163, 3612-3620 (1999); Maekawa et al.
Internal Medicine
39, 90-100 (2000); Fedyk et al.
J. Leukocyte Biol.
66, 667-673 (1999); Peled et al.
Blood
95, 3289-3296 (2000)).
The signal provided by SDF-1 on binding to CXCR4 may also play an important role in tumor cell proliferation and regulation of angiogenesis associated with tumor growth (See “
Chemokines and Cancer”
published by Humana Press (1999); Edited by B. J. Rollins; Arenburg et al.
J. Leukocyte Biol.
62, 554-562 (1997); Moore et al.
J. Invest. Med.
46, 113-120 (1998); Moore et al.
Trends cardiovasc. Med.
8, 51-58 (1998); Seghal et al.
J. Surg. Oncol.
69, 99-104 (1998)); the known angiogenic growth factors VEG-F and bFGF, up-regulate levels of CXCR4 in endothelial cells, and SDF-1 ca

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