Chemistry: molecular biology and microbiology – Vector – per se
Reexamination Certificate
2005-10-17
2010-06-08
Joike, Michele K. (Department: 1636)
Chemistry: molecular biology and microbiology
Vector, per se
C536S023100, C536S023200, C435S325000
Reexamination Certificate
active
07732194
ABSTRACT:
Isolated DNAs encoding the enzyme I-SpomI and its recognition and cutting site are provided. The DNA sequences can be incorporated in cloning and expression vectors, transformed cell lines and transgenic animals. The vectors are useful in gene mapping and site-directed insertion of genes.
REFERENCES:
patent: 5474896 (1995-12-01), Dujon et al.
patent: 5830729 (1998-11-01), Jaisser et al.
patent: 2004/0031072 (2004-02-01), La Rosa et al.
McCarroll et al, Stable insect cell cultures for recmbinant protein production. Current Opin. In Biotech. 8: 590-594, 1997.
Wickham, Targeting Adenovirus, Gene Therapy 7: 110-114, 2000.
Accession No. AB009363.
Inagaki et al. Algae or Protozoa: Phylogenetic Position of Euglenophytes and Dinoflagellates as Inferred from Mitochondrial Sequences. J Mol Evol 45: 295-300, 1997.
Capecchi, “Altering the Genome by Homologous Recombination,”Science244:1288-1292, 1989.
Smithies et al., “Insertion of DNA Sequences into the Human Chromosomal β-globin Locus by Homologous Recombination,”Nature317:230-234, 1985.
Berinstein et al., “Gene Replacement with One-Sided Homologous Recombination, ”Mol. Cell Biol.12:360-367, 1992.
Brenner et al., “Double-strand Gap Repair Results in Homologous Recombination in Mouse L Cells,”Proc. Natl. Acad. Sci. USA83:1762-1766, 1986.
Lin et al., “Repair of Double-Stranded DNA Breaks by Homologous DNA Fragments During Transfer of DNA into Mouse L Cells,”Mol. Cell Biol.10:113-119, 1990.
Lin et al., “Intermolecular Recombination Between DNAs Introduced into Mouse L Cells is Mediated by a Nonconservative Pathway That Leads to Crossover Products,”Mol. Cell. Biol.10:103-112, 1990.
Jessberger and Berg, “Repair of Deletions and Double-Strand Gaps by Homologous Recombination in a Mammalian In Vitro System,”Mol. Cell Biol.11:445-457, 1991.
Jacquier and Dujon, “An Intron-Encoded Protein is Active in a Gene Conversion Process That Spreads an Intron into a Mitochondrial Gene,”Cell41:383-394, 1985.
Plessis et al., “Site-Specific Recombination Determined by I-SceI, a Mitochondrial Group I Intron-Encoded Endonuclease Expressed in the Yeast Nucleus,”Genetics130:451-460, 1992.
Thierry et al., “Cleavage of Yeast and Bacteriophase T7 Genomes at a Single Site Using the Rare Cutter Endonuclease I-SceI,”Nucleic Acids Res.19:189-90, 1991.
Kilby et al., “Site-Specific Recombinases: Tools for Genome Engineering,”Reviews9:413-421, 1993.
Szostak et al., “The Double-Strand-Break Repair Model for Recombination,”Cell33:25-35, 1983.
Anglana and Bacchetti, “Construction of a Recombinant Adenovirus for Efficient Delivery of the I-SceI Yeast Endonuclease to Human Cells and its Application in the In Vivo Cleavage of Chromosomes to Expose New Potential Telomeres,”Nucl. Acids Res.27:4276-4281, 1999.
Bellaiche et al., “I-SceI Endonuclease, a New Tool for Studying DNA Double-Strand Break Repair Mechanisms in Drosophila,”Genetics152:1037-1044, 1999.
Choulika et al., “The Yeast I-SceI Meganuclease Induces Site-Directed Chromosomal Recombination in Mammalian Cells,”CR Acad. Sci. III317:1013-1019, 1994.
Choulika et al., “Induction of Homologous Recombination in Mammalian Chromosomes by Using the I-Scel System ofSaccharomyces cerevisiae,”Mol. Cell Biol.15:1968-1973, 1994.
Cohen-Tannoudji et al., “I-SceI-Induced Gene Replacement at a Natural Locus in Embryonic Stem Cells,”Mol. Cell Biol.18:1444-1448, 1998.
Liang and Garrard, “Targeted Linearization of DNA in Vivo,”Methods17:95-103, 1999.
Machida et al., “Characterization of the Transposition Pattern of the Ac Element inArabidopsis thalianaUsing Endonuclease I-SceI,”Proc. Natl. Acad. Sci. USA94:8675-8680, 1997.
Melkerson-Watson et al., “Integrated Genomic Map from UropathogenicEscherichia coliJ96,”Infect. Immun.68:5933-5942, 2000.
Mogila et al., “Expression of I-SceI in Drosophilia to Induce DNA Double-Strand Breaks,”Methods Mol. Biol.113:439-445, 1999.
Monteilhet et al., “Purification and Characterization in the in vitro Activity of I-SceI, a Novel and Highly Specific Endonuclease Encoded by a Group I Intron,”Nucl. Acids Res.18:1407-1413, 1990.
Nahon and Raveh, “A Tool for Enhancing Site-Specific Gene Integration in Mammalian Cells,”Adv. Exp. Med. Biol.451:411-414, 1998.
Neuveglise et al., “A Shuttle Mutagenesis System for Tagging Genes in the YeastYarrowia lipolytica,”Gene213:37-46, 1998.
Nicolas et al., “Creation and Repair of Specific DNA Double-Strand Breaks in Vivo Following Infection with Adenovirus Vectors ExpressingSaccharomyces cerevisiaeHO Endonuclease,”Virology266:211-224, 2000.
Perrin et al., “Asymmetrical Recognition and Activity of the I-SceI Endonuclease on its Site and on Intron-Exon Junctions,”Embo J.12:2939-2947, 1993.
Posfai et al., “Markerless Gene Replacement inEscherichia coliStimulated by a Double-Strand Break in the Chromosome,”Nucl. Acids Res.27:4409-4415, 1999.
Puchta, “Use of I-SceI to Induce DNA Double-Strand Breaks in Nicotiana,”Methods Mol. Biol.113:447-451, 1999.
Rong et al., “Gene Targeting by Homologous Recombination in Drosophila,”Science288:2013-2018, 2000.
Thierry et al., “Cleavage of Yeast and Bacteriophage T7 Genomes at a Single Site Using the Rare Cutter Endonuclease I-SceI,”Nucl. Acids Res.19:189-190, 1991.
Segal et al., “Endonuclease-Induced, Targeted Homologous Extrachromosomal Recombination inXenopus oocytes,” Proc. Natl. Acad. Sci. USA92:806-810, 1995.
Kirk et al., “Species-Specific Double-Strand Break Repair and Genome Evolution in Plants,”EMBO19(20):5562-5566, 2000.
Fairhead and Dujon, “Consequences of Unique Double-stranded Breaks in Yeast Chromosomes: Death or Homozygosis,”Mol. Gen. Genet.240:170-180, 1993.
LeMouellic et al., “Targeted Replacement of the Homeobox Gene Hox-3.1 by theEscherichia coli lacZ in Mouse Chimeric Embryos,”Proc. Natl. Acad. Sci. USA87:4712-4716, 1990.
Valancius and Smithies, “Double-Strand Gap Repair in a Mammalian Gene Targeting Reaction,”Mol. Cell Biol.11:4389-4397, 1991.
Dujon, “Group I Introns as Mobile Genetic Elements: Facts and Mechanistic Speculations—a Review,”Gene82:91-114, 1989.
Lambowitz et al., “Introns as Mobile Genetic Elements,”Annu Rev. Biochem.62 (5):87-622, 1993.
Belfort et al., “Homing Endonucleases: Keeping the House in Order,”Nucleic Acids Res.25:3379-3388, 1997.
Jurica et al., “Homing Endonucleases: Structure, Function and Evolution,”Cell Mol. Life Sci.55:1304-1326, 1999.
Kennell et al., “Reverse Transcriptase Activity Associated with Maturase-Encoding Group II Introns in Yeast Mitochondria,”Cell, 73:133-146, 1993.
Zimmerly et al., “A Group II Intron RNA is a Catalytic Component of a DNA Endonuclease Involved in Intron Mobility,”Cell83:529-538, 1995.
Guo et al., “Group II Intron Endonucleases Use Both RNA and Protein Subunits for Recognition of Specific Sequences in Double-Stranded DNA,”Embo J.16:6835-6848, 1997.
Kane et al., “Protein Splicing Converts the Yeast TFP1 Gene Product to the 69-kD Subunit of the Vacuolar H+-Adenosine Triphosphatase,”Science250:651-657, 1990.
Shub et al., “Protein Introns: A New Home for Endonucleases,”Cell71:183-186, 1992.
Dalgaard et al., “Statistical Modeling and Analysis of the LAGLIDADG Family of Site-Specific Endonucleases and Identification of an Intein that Encodes a Site-Specific Endonuclease of the HNH Family,”Nucleic Acids Res.25;4626-4638, 1997.
Pietrokovski, “Modular Organization of Inteins and C-Terminal Autocatalytic Domains,”Protein Sci.7:64-71, 1998.
Perler, “Protein Splicing of Inteins and Hedgehog Autoproteolysis: Structure, Function, an
de Wet, legal representative Eoné
Dujon Bernard
Harington Alexis
Harington, legal representative John Sullivan
Pellenz Stefan
Centre National de la Recherche Scientifique
Finnegan Henderson Farabow Garrett & Dunner L.L.P.
Institut Pasteur
Joike Michele K.
Universite Pierre et Marie Curie (Paris VI)
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