Capped synthetic RNA, analogs, and aptamers

Organic compounds -- part of the class 532-570 series – Organic compounds – Carbohydrates or derivatives

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435194, 536 231, 536 2431, 536 2432, 536 2531, 536 2534, C07H 2100, C07H 2102, C12N 912

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active

061110957

ABSTRACT:
A method is provided for making synthetic capped RNAs. These compounds serve as substrates for the virally encoded endonuclease associated with influenza virus. We are able to assay for this unique and specific viral activity of cleavage of a capped RNA in vitro. Therefore, screening of inhibitors of this activity is possible. In addition, short non-extendible (due to their length or because of the modification of the 3'-end of the oligo, i.e. 3'-dA) RNAs are potent inhibitors of the cleavage of capped RNAs by influenza endonuclease. Finally, these compounds may be used to investigate viral and cellular mechanisms of transcription/translation or mRNA maturation.

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