Capillary array and related methods

Chemistry: molecular biology and microbiology – Apparatus – Including measuring or testing

Reexamination Certificate

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C435S007100, C435S283100, C435S287100, C435S287200, C435S288600

Reexamination Certificate

active

08003376

ABSTRACT:
The invention provides methods and devices for detecting the presence of one or more target analytes in a sample employing a channel having affixed therein one or more binding partners for each target analyte. Assays are carried out by transporting the sample through the channel to each successive binding partner so that target analyte present in said sample binds to the corresponding binding partner. The sample is then transported beyond the binding partner(s), followed by detection of any target analyte bound to each binding partner. In one embodiment, binding efficiency is increased by the use of segmented transport, wherein a first bolus or bubble of a fluid that is immiscible with the sample precedes the sample during transport and a second bolus or bubble of a fluid that is immiscible with the sample follows the sample. Many configurations are possible for the device of the invention. A preferred device includes: a substrate with a channel formed in its surface, and a cover element that overlies and seals the channel. Binding partner(s) are affixed to the surface of the cover element facing the channel lumen.

REFERENCES:
patent: 3479141 (1969-11-01), Smythe et al.
patent: 3635680 (1972-01-01), Peoples et al.
patent: 3804593 (1974-04-01), Smythe et al.
patent: 4253846 (1981-03-01), Smythe et al.
patent: 4281062 (1981-07-01), Kallis
patent: 4685463 (1987-08-01), Williams
patent: 4753775 (1988-06-01), Ebersole et al.
patent: 4853336 (1989-08-01), Saros et al.
patent: 4853366 (1989-08-01), Evans et al.
patent: 5268147 (1993-12-01), Zabetakis et al.
patent: 5399497 (1995-03-01), Kumar et al.
patent: 5494562 (1996-02-01), Maley et al.
patent: 5622868 (1997-04-01), Clarke et al.
patent: 5632957 (1997-05-01), Heller et al.
patent: 5656502 (1997-08-01), MacKay et al.
patent: 5776672 (1998-07-01), Hashimoto et al.
patent: 5804384 (1998-09-01), Muller et al.
patent: 5866345 (1999-02-01), Wilding et al.
patent: 5942443 (1999-08-01), Parcc et al.
patent: 5952173 (1999-09-01), Hansmann et al.
patent: 6046056 (2000-04-01), Parce et al.
patent: 6130098 (2000-10-01), Handique et al.
patent: 6210910 (2001-04-01), Walt et al.
patent: 6225047 (2001-05-01), Hutchens et al.
patent: 6348354 (2002-02-01), Adolfsen et al.
patent: 6395557 (2002-05-01), Fouillet et al.
patent: 6473171 (2002-10-01), Buttry et al.
patent: 6610499 (2003-08-01), Fulwyler et al.
patent: 6767706 (2004-07-01), Quake et al.
patent: 6818184 (2004-11-01), Fulwyler et al.
patent: 6989237 (2006-01-01), Fulwyler et al.
patent: 7741104 (2010-06-01), Fulwyler et al.
patent: 2001/0029049 (2001-10-01), Walt et al.
patent: 2005/0121322 (2005-06-01), Say et al.
patent: 0 969 083 (2000-01-01), None
patent: 1 231 482 (1971-05-01), None
patent: WO 98/43739 (1998-10-01), None
patent: WO 99/42809 (1999-08-01), None
patent: WO 02/18949 (2002-03-01), None
US Office Action Mar. 18, 2002 issued in U.S. Appl. No. 09/652,873.
US Office Action Jul. 31, 2002 issued in U.S. Appl. No. 09/652,873.
US Notice of Allowance Jan. 14, 2003 issued in U.S. Appl. No. 09/652,873.
US Office Action dated Nov. 18, 2003 issued in U.S. Appl. No. 10/418,384.
US Notice of Allowance dated Jul. 6, 2004 issued in U.S. Appl. No. 10/418,384.
US Office Action dated Jan. 27, 2005 issued in U.S. Appl. No. 10/960,224.
US Notice of Allowance dated Jul. 29, 2005 issued in U.S. Appl. No. 10/960,224.
US Office Action dated Jun. 5, 2008 issued in U.S. Appl. No. 11/293,047.
US Office Action Final dated Jan. 5, 2009 issued in U.S. Appl. No. 11/293,047.
US Office Action dated Aug. 6, 2009 issued in U.S. Appl. No. 11/293,047.
US Notice of Allowance dated Feb. 8, 2010 issued in U.S. Appl. No. 11/293,047.
PCT International Search Report dated Oct. 7, 2002 issued in WO 02/018949 (PCT/US2001/025775).
PCT Written Opinion dated Nov. 22, 2002 issued in WO 02/018949 (PCT/US2001/025775).
PCT International Preliminary Examination Report dated Jan. 16, 2003.
European Office Action dated Feb. 13, 2006 issued in EP 01 965 979.6.
European Office Action dated Sep. 7, 2007 issued in EP 01 965 979.6.
European Communication under Rule 71 (3) EPC (Intention to Grant) dated Mar. 3, 2008 issued in EP 01 965 979.6.
European Decision to Grant dated Sep. 18, 2008 issued in EP 01 965 979.6.
DeRisi, Joseph et al., (Dec. 1996) “Use of a cDNA Microarray to Analyse Gene Expression Patterns in Human Cancer”,Nature Genetics14(4):457-460.
Effenhauser, C.S. et al, (1997) “Integrated Capillary Electrophoresis on Flexible Silicone Microdevices: Analysis of DNA Restriction Fragments and Detection of Single DNA Molecules on Microchips”,Anal. Chem. 69:3451-3457.
Fodor, Stephen P.A. et al., (Feb. 1991) “Light-directed, Spatially Addressable Parallel Chemical Synthesis”,Science251:767-773.
Freemantle, Michael, (1999) “Downsizing Chemistry”,Science/Technology77(8):27-36.
Gallardo, Benedict S. et al., (1999) “Electrochemical Principles for Active Control of Liquids on Submimillimeter Scales”,Science283:(5398):57-60.
Gilles, Patrick N. et al., (Apr. 1999) “Single Nucleotide Polymorphic Discrimination by an Electronic Dot Blot Assay on Semiconductor Microchips”,Nature Biotechnology17:365-370.
Guo, Zhen et al., (1994) “Direct Fluorescence Analysis of genetic Polymorphisms by Hybridization With Oligonucleotide Arrays on Glass Supports”,Nucleic Acids Research22(24):5456-5465.
Kallioniemi, 0-P, et al., (Aug. 1, 1994) “Optimizing Comparative Genomic Hybridization for Analysis of DNA Sequence Number Changes in Solid Tumors”,Genes, Chromosomes&Cancer, XX, XX, 10(4):231-243.
Kallioniemi, A., (Oct. 30, 1992) “Comparative Genomic Hybridization for Molecular Cytogenetic Analysis of Solid Turmors”,Science, American Association for the Advancement of Science, U.S. 258(5083) 818-821.
Kallioniemi,, A. et al. (Mar. 1, 1994) “Detection and Mapping of Amplified DNA Sequences in Breast Cancer by Comparative Genomic Hybridization”,Proceedings of the National Academy of Sciences of USA, National Academy of Science, Washington, US, 91:2156-2160.
Kononen, Juha et al., (Jul. 1998) “Tissue Microarrays for High-Throughput Molecular Profiling of Tumor Specimens”,Nature Medicine4(7):844-847.
Manoir Du, S. et al., (1995) “Quantitative Analysis of Comparative Genomic Hybridization”,Cytometry, Alan Liss, New York, 19(1):27-41.
Pinkel, Daniel et al., (Oct. 1998) “High Resolution Analysis of DNA Number Variation Using Comparative Genomic Hybridization to Microarrays”,Nature Genetics20:207-211.
Pollock, Jonathan R. et al., (Sep. 1999) “Genome-wide Analysis of DNA—number Changes Using cDNA Microarrays”,Nature Genetics23:41-46.
Rice, C.L. et al., (1965) “Electrokinetic Flow in a Narrow Cylindrical Capillary”,J. Phys. Chem. 69:4017-4024.
Shalon, Dari et al., (Jul. 1996) “A DNA Microarray System for Analyzing Complex DNA Samples Using Two-color Fluorescent Probe Hybridization”,Genome Research6(7):639-645.
Skeggs, L.T. et al., (1957) “An Automatic Method for Colorimetric Analysis”,American Journal of Clinical Pathology28(3):311-322.
Snyder et al., (1976) “Dispersion in Segmented Flow Through Glass Tubing in a Continuous-Flow Analysis: The Ideal Model”,Anal. Chem. 48(7):1018-22.
Snyder, L.R. et al., (1976) “Dispersion in Segmented Flow Through Glass Tubing in Continuous-Flow Analysis: The Nonideal Model”,Anal. Chem.48(7):1023-27.

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