Biotin containing C-glycoside nucleic acid labeling compounds

Chemistry: molecular biology and microbiology – Measuring or testing process involving enzymes or... – Involving nucleic acid

Reexamination Certificate

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

C536S023100, C536S025100

Reexamination Certificate

active

06864059

ABSTRACT:
Nucleic acid labeling compounds including the following structure are disclosed:wherein A is a triphosphate group with apporpriate counterions, said counterions selected from the group consisting of H+, Na+, Li+, K+, and NH4+; X is O; Y is OH; Z is OH; L is selected from the group consisting of —CH═CH—C(O)—NH—CH2—CH2—NH—C(O)— and —CH2—CH2—C(O)—NH—CH2—CH2—NH—C(O); M is —(CH2)45—NH—, n is 1 and Q is biotin having the structure:The labeling compounds are suitable for enzymatic attachment to a nucleic acid, either terminally or internally, to provide a mechanism of nucleic acid detection.

REFERENCES:
patent: 3352849 (1967-11-01), Shen et al.
patent: 3817837 (1974-06-01), Rubenstein et al.
patent: 3850752 (1974-11-01), Schuurs et al.
patent: 3891623 (1975-06-01), Vorbruggen et al.
patent: 3939350 (1976-02-01), Kronick et al.
patent: 3996345 (1976-12-01), Ullman et al.
patent: 4275149 (1981-06-01), Litman et al.
patent: 4277437 (1981-07-01), Maggio et al.
patent: 4366241 (1982-12-01), Tom et al.
patent: 4594339 (1986-06-01), Lopez et al.
patent: 4981783 (1991-01-01), Augenlicht
patent: 4997928 (1991-03-01), Hobbs, Jr.
patent: 5002867 (1991-03-01), Macevicz
patent: 5143854 (1992-09-01), Pirrung et al.
patent: 5151507 (1992-09-01), Hobbs, Jr. et al.
patent: 5202231 (1993-04-01), Drmanac et al.
patent: 5242796 (1993-09-01), Prober et al.
patent: 5262536 (1993-11-01), Hobbs, Jr.
patent: 5324633 (1994-06-01), Fodor et al.
patent: 5332666 (1994-07-01), Prober et al.
patent: 5422241 (1995-06-01), Goldrick et al.
patent: 5424186 (1995-06-01), Fodor et al.
patent: 5445934 (1995-08-01), Fodor et al.
patent: 5543292 (1996-08-01), Imai et al.
patent: 5571639 (1996-11-01), Hubbell et al.
patent: 5608063 (1997-03-01), Hobbs, Jr. et al.
patent: 5744305 (1998-04-01), Fodor et al.
patent: 6174998 (2001-01-01), Muhlegger et al.
patent: 6211158 (2001-04-01), Seela et al.
patent: 19509038 (1996-09-01), None
patent: 0132621 (1985-02-01), None
patent: 0159719 (1985-10-01), None
patent: 0252683 (1988-01-01), None
patent: 0266787 (1988-05-01), None
patent: 0320308 (1989-06-01), None
patent: 0322311 (1989-06-01), None
patent: 0336731 (1989-10-01), None
patent: 0535242 (1993-04-01), None
patent: 0717113 (1996-06-01), None
patent: 0721016 (1996-07-01), None
patent: 61109797 (1986-05-01), None
patent: WO 8910977 (1989-11-01), None
patent: WO 9000626 (1990-01-01), None
patent: WO 9003370 (1990-04-01), None
patent: WO 9004652 (1990-05-01), None
patent: WO 9015070 (1990-12-01), None
patent: WO 9202258 (1992-02-01), None
patent: WO 9500530 (1992-05-01), None
patent: WO 9210092 (1992-06-01), None
patent: WO 9210588 (1992-06-01), None
patent: WO 9316094 (1993-08-01), None
patent: WO 9317126 (1993-09-01), None
patent: WO 9504594 (1995-02-01), None
patent: WO 9504833 (1995-02-01), None
patent: WO 9504834 (1995-02-01), None
patent: WO 9511995 (1995-05-01), None
patent: WO 9520681 (1995-08-01), None
patent: WO 9530774 (1995-11-01), None
patent: WO 95355505 (1995-12-01), None
patent: WO 9628460 (1996-09-01), None
patent: WO 9710365 (1997-03-01), None
patent: WO 9727317 (1997-07-01), None
patent: WO 9728176 (1997-08-01), None
patent: WO 9729212 (1997-08-01), None
patent: WO 9811104 (1998-03-01), None
patent: WO 0006771 (2000-02-01), None
Nelson, Paul S.; Muthini, Sylvester; Kent, Mark A.; Smith, Thomas H., Nucleosides & Nucleotides, 16(10 & 11), 1951-1959 (English) 1997.*
Akita, Y., et al., “Cross-Coupling Reaction of Chloropyrazines with Acetylenes”, Chemical & Pharmaceutical Bulletin, 34 (4), (Apr. 1986), pp. 1447-1458.
Aoyagi, M., et al., “Nucleosides and Nucleotides. 115. Synthesis of 3-Alkyl-3-Deazainosines via Palladium-Catalyzed Intramolecular Cyclization: A New Conformational Lock with the Alkyl Group at the 3-Position of the 3-Deazainosine in Anti-Conformation”, Tetrahedron Letters, 34 (1), (1993), pp. 103-106.
Avila, J.L., et al., “Biological Action of Pyrazolopyrimidine Derivatives Against Trypanosoma Cruzi. Studies In Vitro and In Vivo”, Comp. Biochem. Physiol.., 86C (1), (1987), pp. 49-54.
Barringer, et al., “Blunt-end and single-strand litigations byEscherichia coliligase: influence on an in vitro amplification scheme”, Gene, 89, (1990), pp. 117-122.
Basnak, I., et al., “Some 6-Aza-5-Substituted-2′-Deoxyuridines Show Potent and Selective Inhibition of Herpes Simplex Virus Type 1 Thymidine Kinase”, Nucleosides & Nucleotides, 17 (1-3), (1998), pp. 187-206.
Beabealashvilli, R.S., et al., “Nucleoside 5′-triphosphates modified at sugar residues as substrates for calf thymus terminal deoxynucleotidyl transferase and for AMV reverse transcriptase”, Biochimica et Biophysica Acta, 868, (1986), pp. 136-144.
Bergeron, et al., “Reagents for the stepwise functionalization of spermine”, J. Org. Chem., 53, (1998), pp. 3108-3111.
Bergstrom, D.E., et al., “Design and Synthesis of Heterocyclic Carboxamides as Natural Nucleic Acid Base Mimics”, Nucleosides & Nucleotides, 15 (1-3), (1996), pp. 59-68.
Bobek, M., et al., “Nucleic Acids Components and their Analogues. XCVII. Synthesis of 5-Hydroxymethyl-6-Aza-2′-Deoxyuridine and 5-Hydroxymethyl-6-Aza-2′-Deoxycytidine”, Collection Czechoslov. Chem. Commun., 32, (1967), pp. 3581-3586.
Brody, R.S., et al., “The Purification of Orotidine-5′-phosphate Decarboxylase from Yeast by Affinity Chromatography”, The Journal of Biological Chemistry 254 (10), (1979), pp. 4238-4244.
Broude, N.E., et al., “Enhanced DNA sequencing by hyridization”, PNAS, 91 (1994), 3072-3076.
Canard, B., et al., “Catalytic editing properties of DNA polymerases”, PNAS, 92, (Nov. 1995), pp. 10859-10863.
Cech, D., et al., “New Approaches Toward the Synthesis of Non-Radioactively Labeled Nucleoside Triphosphates as Terminators for DNA Sequencing”, Collect. Czech. Chem. Commun., 61, Special Issue, (1996), pp. S297-S300.
Chee, M., et al., “Accessing Genetic Information with High-Density DNA Arrays”, Science, 274, (Oct. 25, 1996), pp. 610-614.
Chernetskii, V.P., et al., “Anomalous nucleoside and related compounds, XIV. Derivatives of 6-azacytidine.”, Chemical Abstracts, 74 (21), Abstract No. 112367j, (1971).
Chidgeavadez, Z.G., et al., “2′, 3′-Dideox-3′ aminonucleoside 5′-triphosphates are the terminators of DNA synthesis catalyzed by DNA polymerases”, Nucleic Acids Research, 12 (3), (1984), pp. 1671-1686.
Chu, et al., “General Synthesis of 2′, 3′-dideoxynucleosides and 2′, 3′-didehydro-2′, 3′-dideoxynucleosides”, J. Org. Chem., 54, (1989), pp. 2217-2225.
Cottam, Howard, B., et al., “New Adenosine Kinase Inhibitors with Oral Antiinflammatory Activity: Synthesis and Biological Evaluation”, Journal of Medicinal Chemistry, 36 (22), Oct. 29, 1993), pp. 3424-3430.
Curriden, M., “A New Evidence Tool—First Use of Mitochondrial DNA Test in a U.S. criminal trial”, ABA Journal, (Nov. 1996), 1 p.
Danscher, et al., “Autometallographic silver amplification of colloidal gold”, J. Histotech., 16, (1993), pp. 201-207.
Depelley, J., et al., “New Non-Aromatic Triazinic Nucleosides Synthesis and Antiretroviral Evaluation of Beta-Ribosylamine Nucleoside Analogs”, Nucleosides & Nucleotides 15 (5), (1996), pp. 995-1008.
Dueholm, et al., “2-3-dideoxy-furanoses in convergent synthesis of 2′, 3′-dideoxy nucleosides”, Synthesis, (1992), pp. 1-22.
Edo, K., et al., “Studies on Pyrimidine Derivatives. IX. Coupling Reaction of Mono-substituted Acetylenes with Iodopyrimidines”, Chemical & Pharmaceutical Bulletin, 26(12), (Dec. 1978), pp. 3843-3850.
Eggers, M., et al., “A Microchip for Quantitative Detection of Molecules Utilizing Lum

LandOfFree

Say what you really think

Search LandOfFree.com for the USA inventors and patents. Rate them and share your experience with other people.

Rating

Biotin containing C-glycoside nucleic acid labeling compounds does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Biotin containing C-glycoside nucleic acid labeling compounds, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Biotin containing C-glycoside nucleic acid labeling compounds will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFUS-PAI-O-3377415

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.