Chemistry: molecular biology and microbiology – Apparatus – Including measuring or testing
Reexamination Certificate
1998-12-31
2001-08-21
Chin, Christopher L. (Department: 1641)
Chemistry: molecular biology and microbiology
Apparatus
Including measuring or testing
C204S400000, C204S403060, C422S082050, C422S082080, C435S007200, C435S014000, C435S173300, C435S287200, C435S288700, C435S808000, C435S817000, C436S172000, C436S518000, C436S805000
Reexamination Certificate
active
06277627
ABSTRACT:
TECHNICAL FIELD
The present invention relates, in general, to biosensors and, in particular, to a glucose biosensor comprising a genetically engineered Glucose Binding Protein.
BACKGROUND
Biosensors couple highly specific biomolecular ligand binding events to changes in physical signals, thereby providing analytical tools that can measure the presence of single molecular species in complex mixtures. (Hall, Biosensors, Prentice-Hall: Englewood Cliffs (1991)). Most biosensors are naturally occurring macromolecules, such as enzymes or antibodies, which provide the desired analyte specificity, but often are not well suited to simple signal transduction mechanisms. (Griffiths et al, Tr. Biotech. 11:122-130 (1993)). One solution to this problem is to use protein engineering techniques to integrate signal transduction functions directly into proteins, adapting them to straightforward detection technologies, rather than developing instrumentation specific to the properties of a particular protein (Adams et al, Nature 39:694-697 (1991); Braha et al, Chem. Biol. 4:497-505 (1997); Brennan et al, Proc. Natl. Acad. Sci. U.S.A. 92:5783-5787 (1995); Brune et al, Biochemistry 33:8262-8271 (1994); Cornell et al, Nature 387:580-583 (1997); Gilardi et al, Anal. Chem. 66:3840-3847 (1994); Godwin et al, J. Am. Chem. Soc. 118:6514-6515 (1996); Marvin et al, Proc. Natl. Acad. Sci. U.S.A. 94:4366-4371 (1997); Post et al, J. Biol. Chem. 269:12880-12887 (1994); Romoser, J. Biol. Chem. 272:13270-13274 (1997); Stewart et al, J. Am. Chem. Soc. 116:415-416 (1994); Thompson et al, J. Biomed. Op. 1:131-137 (1996); Walkup et al, J. Am. Chem. Soc. 119:5445-5450 (1997)). A simple approach to building such integrated signal transducers is to exploit optical detection strategies based on changes in fluorescent reporter groups which respond to ligand binding (Guiliano et al, Annu. Rev. Biophys. Biomolec. Struct. 24:405-434 (1995); Czamik, Chem. Biol. 2:432-438 (1995)). Fluorophores can be site-specifically introduced into a protein by using total synthesis, semi synthesis, or gene fusions. In this way pairs of fluorophores can be arranged for detection of binding by fluorescence energy transfer, or a single, environmentally-sensitive fluorophore can be positioned to respond to conformational changes accompanying binding events. (See references cited above.)
Ideally, the structural relationship between ligand binding site and reporter group is such that each can be manipulated independently, allowing a modular approach to the optimization of the properties of the binding site or the fluorophore. (Marvin et al, Proc. Natl. Acad. Sci. U.S.A. 94:4366-4371 (1997); Walkup et al, J. Am. Chem. Soc. 119:3443-3450 (1997); Cheng et al, J. Am. Chem. Soc. 118:11349-11356 (1996); Ippolito et al, Proc. Natl. Acad. Sci. U.S.A. 92:5017-5021 (1995); Elbaum et al, J. Am. Chem. Soc. 118:8381-8387(1996)). One way to achieve such modularity is to spatially separate the two sites to minimize steric interference between them. Spatial separation of the reporter group and the binding site requires that the behavior of the fluorophore remain coupled to the degree of occupancy of the ligand binding site via an allosteric linkage mechanism. Recently, it has been shown that it is possible to engineer such integrated fluorescent allosteric signal transducer (FAST) functions in the Maltose Binding Protein (MBP) of
E. coli
by taking advantage of the large conformational changes that occur upon ligand binding in this protein, using a structure-based rational design approach (Marvin et al, Proc. Natl. Acad. Sci. U.S.A. 94:4366-4371 (1997)).
The present invention relates, in one embodiment, to a Glucose/Galactose Binding Protein with engineered FAST functions and to a new class of fluorescent glucose sensors with applications in the food industry (Suleiman et al, In:Biosensor Design and Application, Matthewson and Finley, Eds. American Chemical Society, Washington, D.C., Vol. 511 (1992)), and clinical chemistry (Wilkins et al, Med. Eng. Phys. 18:273-278 (1996); Pickup, Tr. Biotech. 11:285-291 (1993); Meyerhoff et al, Endricon 6:51-58 (1996)).
SUMMARY OF THE INVENTION
The present invention relates to a glucose biosensor comprising a genetically engineered Glucose Binding Protein (GBP). In a specific embodiment, the invention relates to,a GBP engineered to include mutations that allow site specific introduction of environmentally sensitive reporter groups. The signal of these prosthetic groups changes linearly with the degree of glucose binding. Thus, the glucose sensor of the invention can be used, for example, for detection of glucose in blood or industrial fermentation processes.
REFERENCES:
Li et al, “Comparative stereochemical analysis of glucose-binding proteins for rational design of glucose-specific agents”, J. Biomater. Sci. Polymer Edn, 9(4):327-344 (1998).
Wilkins and Atanasov, “Glucose monitoring: state of the art and future possibilities”, Med. Eng. Phys. 18(4):273-288 (1996).
Pickup, “Developing glucose sensors for n vivo use”, Trends in Biochech. 11:285-291 (1993).
Marvin et al, “The rational design of allosteric interactions in a monomeric protein and its applications to the construction of biosensors”, Proc. Natl. Acad. Sci. USA 94:4366-4371 (1997).
Brune et al, “Direct, Real-Time Measurement of Rapid Inorganic Phosphate Release Using a Novel Fluorescent Probe and Its Application to Actomyosin Subfragment 1 ATPase”, Biochemistry 33(27):8262-8271 (1994).
Marvin and Hellinga, “Engineering Biosensors by Introducing Fluorescent Allosteric Signal Transducers: Construction of a Novel Glucose Sensor”, J. Amer. Chem. Soc. 120(1):7-11 (1998).
Drueckhammer, “New approaches to fluorescence based glucose sensors”, Database FEDRIP on Dialog, NTIS, 00313296, Identifying No. 1R21DK55234-01, Abstract (1998).
Rao, “Protein engineered glucose sensor”, Database FEDRIP on Dialog, NTIS, 00352410, Identifying No. 1R01RR14170-01, Abstract (1998).
Rougier et al, “Use of Lectin to Detect the Sugar Components of Maize Root Cap Slime”, The Journal of Histochemistry and Cytochemistry 27(4):878-881 (1979).
Careaga et al, “Large Amplitude Twisting Motions of an Interdomain Hinge: A Disulfide Trapping Study of the Galactose-Glucose Binding Protein”, Biochemistry 34:3048-3055 (1995).
Vyas et al, “Crystallographic Analysis of the Epimeric and Anomeric Specificity of the Periplasmic Transport/Chemosensory Protein Receptor for D-Glucose and D-Galactose”, Biochemistry 33:4762-4768 (1994).
Boos et al, “Transport Properties of the Galactose-binding Protein ofEscherichia coli”, The Journal of Biological Chemistry 247(3):917-924 (1972).
Chin Christopher L.
Duke University
Nixon & Vanderhye P.C.
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