Apparatus for arbitrary peptide synthesis

Details Apparatus for arbitrary peptide synthesis Apparatus for arbitrary peptide synthesis

2006-06-29

2010-12-28

Gakh, Yelena G (Department: 1797)

Chemistry: molecular biology and microbiology

Micro-organism, tissue cell culture or enzyme using process...

Recombinant dna technique included in method of making a...

C435S007200, C435S041000, C435S068100, C422S131000, C536S023100, C536S026260

Reexamination Certificate

active

07858342

ABSTRACT:
Methods, apparatus, systems, computer programs and computing devices related to biologically assembling and/or synthesizing peptides and/or proteins are disclosed.

REFERENCES:
patent: 3647390 (1972-03-01), Kubodera et al.
patent: 5081584 (1992-01-01), Omichinski et al.
patent: 5358862 (1994-10-01), Hardesty et al.
patent: 5562622 (1996-10-01), Tihon
patent: 5635400 (1997-06-01), Brenner
patent: 6457361 (2002-10-01), Takeuchi et al.
patent: 6562622 (2003-05-01), Coia et al.
patent: 6620587 (2003-09-01), Taussig et al.
patent: 6722200 (2004-04-01), Roukes et al.
patent: 6846638 (2005-01-01), Shipwash
patent: 7247448 (2007-07-01), Erdmann et al.
patent: 2002/0127623 (2002-09-01), Minshull et al.
patent: 2003/0100000 (2003-05-01), Martin
patent: 2005/0260653 (2005-11-01), Labaer et al.
patent: 2006/0078888 (2006-04-01), Griffiths et al.
patent: 2006/0223178 (2006-10-01), Barber et al.
patent: 2007/0119510 (2007-05-01), Kartalov et al.
patent: 2009/0081643 (2009-03-01), Preminger et al.
patent: WO 2004/050825 (2004-06-01), None
Josephson, Kristopher, et al. Ribosomal Synthesis of Unnatural Peptides, 2005, Journal of American Chemical Society, vol. 127(33), paes 11727-11735.
Foster, Anthony C., et al. A simplified Rconstitution of mRNA-Directed Petide Synthesis: Activity of the Epsilon Enhancer and an unnatural amino acid, 2001, Analytical Biochemisrty, vol. 297, paes 60-70.
Jungbauer, Lisa M., et al. Experimental and Computational Analysis of Translation Products in Apomyoglobin Expression, 2006, Journal of Molecular Biology, vol. 357, pp. 1121-1143.
U.S. Appl. No. 11/478,551, Hyde et al.
U.S. Appl. No. 11/478,549, Hyde et al.
U.S. Appl. No. 11/478,548, Hyde et al.
U.S. Appl. No. 11/478,546, Hyde et al.
U.S. Appl. No. 11/478,540, Hyde et al.
U.S. Appl. No. 11/478,539, Hyde et al.
U.S. Appl. No. 11/478,382, Hyde et al.
U.S. Appl. No. 11/478,326, Hyde et al.
U.S. Appl. No. 11/478,308, Hyde et al.
Beaulande, Melanie; Tarbouriech, Nicolas; Hartlein, Michael; “Human Cytosolic Asparaginyl-tRNA Synthetase: cDNA Sequence, Functional Expression inEscherichia coliand Characterization as Human Autoantigen”; Nucleic Acids Research; bearing a date of 1998; pp. 521-524; vol. 26, No. 2; Oxford University Press.
Beringer, Malte; Bruell, Christian; Xiong, Liqun; Pfister, Peter; Bieling, Peter; Katunin, Vladimir I.; Mankin, Alexander S.; Bottger, Erik C.; Rodnina, Marina V.; “Essential Mechanisms in the Catalysis of Peptide Bond Formation on the Ribosome”; The Journal of Biological Chemistry; bearing a date of Oct. 28, 2005; pp. 36065-36072; vol. 280, No. 43; The American Society for Biochemistry and Molecular Biology, Inc.
Blanchard, Scott C.; Gonzalez, Ruben L., Jr.; Kim, Harold D.; Chu, Steven; Puglisi, Joseph D.; “Articles: tRNA Selection and Kinetic Proofreading in Translation”; Nature Structural & Molecular Biology; bearing a date of Oct. 2004; pp. 1008-1014; vol. 11, No. 10; Nature Publishing Group; located at: http://www.nature.com
atstructmolbiol.
Blanchard, Scott C.; Kim, Harold D.; Gonzalez, Ruben L., Jr.; Puglisi, Joseph D.; Chu, Steven; “Biophysics: tRNA Dynamics on the Ribosome During Translation”; PNAS; bearing a date of Aug. 31, 2004; pp. 12893-12898; vol. 101, No. 35; The National Academy of Sciences of the USA; located at: www.pnas.org/chi/doi/10.1073/pnas.0403884101.
Bocchetta, Maurizio; Xiong, Liqun; Mankin, Alexander S.; “23S rRNA Positions Essential for tRNA Binding in Ribosomal Functional Sites”; Proceedings of the National Academy of Sciences; bearing a date of Mar. 1998; pp. 3525-3530; vol. 95; The National Academy of Sciences; located at: http://www.pnas.org.
Brandt, Ole; Hoheisel, Jorg D.; “Opinion: Peptide Nucleic Acids on Microarrays and Other Biosensors”; Trends in Biotechnology; bearing a date of Dec. 2004; pp. 617-622; vol. 22, No. 12; Elsevier Ltd; located at: www.sciencedirect.com.
Brune, Martin; Hunter, Jackie L.; Howell, Steven A.; Martin, Stephen R.; Hazlett, Theodore L.; Corrie, John E.T.; Webb, Martin R.; “Mechanism of Inorganic Phosphate Interaction with Phosphate Binding Protein fromEscherichia coli”; Biochemistry; bearing a date of 1998; pp. 10370-10380; vol. 37; American Chemical Society.
Capone, John P.; Sharp, Phillip A.; Rajbhandary, Uttam L.; “Amber, Ochre and Opal Suppressor tRNA Genes Derived From a Human Serine tRNA Gene”; The EMBO Journal; bearing a date of 1985; pp. 213-221; vol. 4, No. 1; IRL Press Limited, Oxford, England.
Dale, Taraka; Uhlenbeck, Olke C.; “Letter to the Editor: Binding of Misacylated tRNAs to the Ribosomal A Site”; RNA; bearing a date of 2005; pp. 1610-1615; vol. 11; Cold Spring Harbor Laboratory Press—RNA Society.
Dale, Taraka; Uhlenbeck, Olke C.; “Opinion: Amino Acid Specificity in Translation”; Trends in Biochemical Sciences; bearing a date of Dec. 2005; pp. 659-665; vol. 30, No. 12; Elsevier Ltd; located at: www.sciencedirect.com.
Deisingh, Anil K.; “I-Section: MEMS Technology in Analytical Chemistry”; The Analyst; bearing a date of 2003; pp. 9-11; vol. 128; The Royal Society of Chemistry.
Dittmar, Kimberly A.; Goodenbour, Jeffrey M.; Pan, Tao; “Tissue-Specific Differences in Human Transfer RNA Expression”; PLOS Genetics; bearing a date of Dec. 2006; pp. 2107-2115; vol. 2, No. 12 e221; located at: www.plosgenetics.org.
Dorywalska, Magdalena; Blanchard, Scott C.; Gonzalez, Ruben L., Jr.; Kim, Harold D.; Chu, Steven; Puglisi, Joseph D.; “Site-Specific Labeling of the Ribosome for Single-Molecule Spectroscopy”; Nucleic Acids Research; bearing a date of 2005; pp. 182-189; vol. 33, No. 1; Oxford University Press.
Englisch, Sabine; Englisch, Uwe; Von Der Haar, Friedrich; Cramer, Friedrich; “The Proofreading of Hydroxy Analogues of Leucine and Isoleucine by Leucyl-tRNA Synthetases fromE. coliand Yeast”; Nucleic Acids Research; bearing a date of 1986; pp. 7529-7539; vol. 14, No. 19; IRL Press Limited, Oxford, England.
Flick, Jeffrey S.; Thorner, Jeremy; “Genetic and Biochemical Characterization of a Phosphatidylinositol-Specific Phospholipase C inSaccharomyces cerevisiae”; Molecular and Cellular Biology; bearing a date of Sep. 1993; pp. 5861-5876; vol. 13, No. 9; American Society for Microbiology.
Gabriel, Kaigham J.; “Machines, Materials and Manufacturing: Engineering Microscopic Machines”; Scientific American; bearing a date of Sep. 1995; pp. 150-153; Scientific American, Inc.
Gau, Jen-JR; Lan, Esther H.; Dunn, Bruce; Ho, Chih-Ming; Woo, Jason C.S.; “A MEMS Based Amperometric Detector forE. coliBacteria Using Self-Assembled Monolayers”; Biosensors & Bioelectronics; bearing a date of 2001; pp. 745-755; vol. 16; Elsevier Science B.V.
Hartman, Matthew C.T.; Josephson, Kristopher; Szostak, Jack W.; “Enzymatic Aminoacylation of tRNA with Unnatural Amino Acids”; PNAS; bearing a date of Mar. 21, 2006; pp. 4356-4361; vol. 103, No. 12; The National Academy of Sciences of the USA; located at: www.pnas.org/cgi/doi/10.1073/pnas.0509219103.
Henderson, Matthew P.A.; Billen, Lieven P.; Kim, Peter K.; Andrews, David W.; “Cell-Free Analysis of Tail-Anchor Protein Targeting to Membranes”; Methods; bearing a date of 2007; pp. 427-438; vol. 41; Elsevier, Inc.; located at: www.sciencedirect.com or www.elsevier.com/locate/ymeth.
Hoffmann, A.; Roeder, R.G.; “Purification of His-Tagged Proteins in Non-Denaturing Conditions Suggests a Convenient Method for Protein Interaction Studies”; Nucleic Acids Research; bearing a date of Aug. 23, 1991; pp. 6337-6338; vol. 19, No. 22; Laboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY, USA.
Hohsaka, Takahiro; Ashizuka, Yuki; Murakami, Hiroshi; Sisido, Masahiko; “Five-Base Codons for Incorporation of Nonnatural Amino Acids into Proteins”; Nucleic Acids Research; bearing a date of 2001; pp. 3646-3651; vol. 29, No. 17; Oxford University Press.
Hohsaka, Takahiro; Ashizuka, Y

Affiliated with

Also associated with

Rating

Apparatus for arbitrary peptide synthesis does not yet have a rating. At this time, there are no reviews or comments for this patent.

If you have personal experience with Apparatus for arbitrary peptide synthesis, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Apparatus for arbitrary peptide synthesis will most certainly appreciate the feedback.

Rate now

Comments { 0 }

Profile ID: LFUS-PAI-O-4189964